OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [Q:0078] and [W:0106]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0.5	0.2	0	0	-0.9	0.8	0	0	-0.1	-0.3	-0.2	0.2	0.1	0	-0.4	0.2	-0.5	0.1	-0.2
F	0.3	-0.6	0.1	0.1	-0.6	-0.2	0.1	0.4	0.2	-0.1	-0.1	-0.2	0.2	0.3	0.1	-0.3	-0.7	0	0	0.1
I	0.5	1.2	-0.3	0.3	-0.1	-0.5	-0.3	-0.3	-0.1	-0.1	0.5	0.2	-0.2	-0.3	0.3	0	-0.3	-0.3	-0.1	0
L	0.1	-0.1	-0.2	0.2	-0.2	-0.3	-0.1	-0.2	-0.1	0.4	-0.2	-0.4	-0.2	-0.3	0.1	1	0.4	0.7	-0.1	-0.2
V	-0.5	0.7	-0.1	0	-0.3	-0.3	-0.2	-0.3	0.3	-0.1	0.4	-0.4	-0.2	-0.4	-0.2	0.5	0.5	-0.2	0.1	0.6
M	-0.1	0.1	-0.4	0.3	0.1	-0.1	0	0	0	0	-0.1	-0.3	-0.2	0.4	0.2	-0.1	0.1	-0.1	0	-0.3
W	-0.1	-0.4	-0.2	-0.2	-0.1	-0.1	0.4	-0.4	0	0	0	-0.1	-0.2	0	0	-0.1	-0.2	0	0	0.1
Y	-0.3	0	-0.2	-0.2	0.3	0.3	-0.3	0.4	-0.1	-0.1	0.1	-0.4	0.7	0	0.1	-0.2	-0.4	0	0	0.2
D	-0.4	0.6	0.7	0.3	0.1	0.3	0	0.4	0	0.1	-0.5	0.6	-0.3	-0.5	-0.5	-0.6	-0.5	0.4	-0.1	0.4
E	0	0.4	0.3	0.2	-0.4	0.3	0.3	0.6	0.2	-0.2	-0.5	0.4	-0.2	0.1	-0.4	0.1	-0.7	0.3	-0.2	-0.1
K	0.3	0.1	0.3	-0.2	0.4	0.4	0.5	-0.2	-0.2	-0.2	-0.4	-0.3	-0.4	-0.1	0.3	-0.2	-0.1	0	-0.1	0.2
R	0.1	-0.7	0.1	-0.3	1	0.1	0	-0.3	-0.2	0.3	0.3	-0.7	1.2	0.1	0.1	0.3	-0.7	-0.3	-0.1	0.7
H	0	-0.3	-0.1	0.1	-0.1	1	-0.2	0.2	-0.2	-0.1	-0.1	0.6	-0.5	0.1	0.1	0.1	1.1	0	-0.1	-0.7
N	0.7	0.1	0.2	0.1	0	0.1	0.1	0.3	-0.1	0.1	-0.3	0.2	-0.1	-0.2	-0.2	-0.4	-0.3	-0.3	0.2	-0.1
Q	0.3	-0.4	0	0.1	0.1	0.2	0.2	0	-0.2	-0.2	0.7	0.4	-0.3	-0.1	0.1	0	0.3	-0.3	-0.1	0.1
S	0.2	0	-0.1	0.3	-0.3	-0.2	0.3	0.1	0	-0.2	0.1	0	-0.1	0.1	-0.5	0	0.6	-0.1	0.1	-0.3
T	0.2	0	-0.1	0.3	0.2	0.7	0.1	-0.1	-0.2	-0.1	-0.3	-0.2	0.5	0.4	-0.3	-0.2	0	0	-0.1	0
G	-0.3	0.4	-0.3	-0.4	-0.3	-0.4	1.1	0.5	-0.2	-0.3	0.3	0.4	0.8	-0.4	0.1	-0.5	-0.4	0.5	-0.3	-0.4
P	-0.1	-0.1	0.9	0.2	0.4	-0.3	-0.3	-0.2	-0.1	-0.3	-0.6	-0.5	-0.2	0.5	0.1	0.7	0.3	-0.1	-0.2	-0.3
C	-0.1	-0.5	-0.1	-0.3	0.2	0	-0.3	0.3	0.2	0.6	0	-0.2	0.3	-0.1	-0.1	-0.1	0.6	-0.1	0	-0.4

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0078	0.3	-0.9	-0.4	0	0.1	-1.2	-2.5	-0.7	0.4	0.7	0.5	0.7	0.1	0.2	0.5	0.6	0.3	0.7	0.9	-0.9
0106	0.2	1.6	0.7	1.4	1	-0.2	3	2.2	-1.6	-1.6	-1.2	-0.1	0.5	-1	-1.1	-0.5	-0.3	-1.2	-1.8	0.1

Select residue pair below:

i_j	Score	Prob
0078_0106	0.754	0.69

Local Interactions:

i_j	Score	Prob
0078_0079	1.600	1.00
0077_0078	0.864	0.83
0076_0078	0.809	0.77

See all coupling residues
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