OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [A:0066] and [A:0067]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.4	0.3	-0.1	0.1	0.1	0.2	0	-0.5	-0.3	0.1	-0.1	0	-0.5	-0.1	0.5	0	-0.1	0.4	0.4	0
F	-0.2	-0.2	-0.2	-0.4	-0.1	0.2	-0.1	0	0.1	-0.1	0.4	0.1	0.3	0.6	-0.5	-0.1	0.3	-0.8	-0.1	0.1
I	0.5	-0.4	-0.3	0.3	0.3	-0.2	-0.2	0	0.4	0	-0.2	0.2	-0.8	0.1	0.1	0	0.4	0	-0.2	-0.2
L	0.2	0.1	0.2	0.3	0.3	-0.1	-0.2	-0.5	-0.1	0	0.6	0.8	0.3	0.1	0.5	0	-0.1	-0.6	-0.6	-0.7
V	0.2	0.4	-0.2	0.1	0.2	0.3	-0.1	0.1	0.2	-0.1	-0.2	-0.4	0.3	-0.1	0.1	0	0	-0.1	-0.4	-0.3
M	-0.1	0.1	0.7	0.3	1	0.6	-0.1	-0.3	0.1	-0.5	0.2	0.1	-0.1	-0.4	-0.2	-0.3	-0.1	-0.1	-0.5	-0.2
W	-0.3	-0.1	-0.2	-0.2	-0.4	-0.1	0	0	0.5	-0.1	-0.1	0	-0.1	-0.2	-0.2	-0.3	0.1	0.1	-0.4	-0.1
Y	-0.8	-0.2	-0.1	-0.9	-0.2	-0.1	-0.1	0.2	-0.1	0.1	0.6	0.1	-0.3	0.6	0	0.5	0.1	-0.2	0.2	0.2
D	0.1	0	-1	0.1	-0.1	-0.7	-0.2	0.1	0.5	0.4	-0.1	0.4	0.6	-0.1	0	0.2	-0.5	0.4	0.2	0.3
E	-0.1	-0.3	0.3	0.4	0.1	0.3	-0.1	-0.1	-0.2	0.4	0.1	0.7	-0.2	0.2	-0.4	-0.3	-0.2	-0.1	0.1	0.1
K	-0.4	0.4	0.3	0.5	0	0.1	-0.1	0.4	0	-0.1	0	-0.6	0.4	0.3	-0.4	-0.1	0	-0.1	-0.1	0.5
R	0	-0.4	0.3	0.7	0.3	-0.6	0.1	-0.5	-0.1	-0.4	0.1	-0.2	0	0.5	-0.2	-0.2	0.2	-0.2	0.7	0.2
H	0.3	-0.3	1.1	0.3	-0.1	-0.2	0.6	0.2	-0.2	-0.4	-0.6	-0.2	-0.2	-0.9	0.2	0.1	-0.4	-0.4	1	0
N	0.2	0.4	-0.4	-0.2	-0.9	-0.6	-0.2	1	-0.1	0.1	0	-0.7	-0.1	0.2	0.1	-0.1	0	0.3	0.9	-0.2
Q	-0.3	-0.1	1.4	0.2	0.2	0.7	-0.3	0.2	-0.6	0.1	0.2	0.1	-0.2	-0.2	0.4	-0.2	-0.1	-0.4	-0.2	-0.3
S	0.4	-0.1	-0.6	-0.3	0	0.4	-0.1	-0.1	0.1	-0.4	-0.2	0.5	-0.2	-0.1	0.1	0.3	0.1	0.3	0.4	0.2
T	0.1	0.6	-0.2	-0.3	0.4	0	-0.2	-0.3	-0.1	0	-0.5	0.1	0.2	0.1	-0.1	0.1	0.3	0.1	0.4	0
G	0.2	-0.3	-1	-0.4	-0.3	0.2	-0.4	0.3	0.3	1.1	0.5	0	0.1	0.2	0.6	0.1	0.1	0.6	-0.8	0.2
P	0.3	-0.4	0.4	0.4	0.4	-0.5	0	-0.1	-0.4	-0.2	-0.5	-0.1	0.3	-0.3	-0.1	0.4	0.2	0.2	-0.2	-0.3
C	-0.3	0	0.7	0.1	-0.1	-0.1	0.2	0	0.2	0.6	-0.3	-0.3	0.1	-0.3	-0.5	0	0.2	0.3	-0.6	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0066	0.4	-0.6	-0.1	0.7	0.3	-0.7	-2.5	-0.8	0.3	0.4	0.9	0.5	-0.7	0.3	0.4	0.7	0.2	0.8	0.1	-1.1
0067	0.7	-1.1	0.2	0.4	0.4	-0.8	-2.3	-0.9	0.6	0.8	0.6	0.5	-0.5	0.1	0	0.8	0.7	0.4	0.2	-1.4

Select residue pair below:

i_j	Score	Prob
0064_0067	0.708	0.62

Local Interactions:

i_j	Score	Prob
0066_0067	0.573	0.39
0067_0068	0.551	0.36

See all coupling residues
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