OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [L:0060] and [P:0064]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	-0.1	0.2	-0.1	0.2	-0.4	-0.3	0.3	0.3	-0.3	-0.3	0.5	0.3	-0.1	0.1	0	0	0	-0.2	0.4
F	0	-0.1	-0.2	0.3	-0.3	-0.4	0.1	-0.3	-0.3	-0.2	0.4	0.3	-0.3	-0.4	0.7	-0.3	-0.5	1	0.6	0
I	0	0.1	-0.2	0	-0.4	-0.1	0	0.3	0.3	0	-0.3	-0.3	0.2	0.1	-0.6	0.2	0.5	-0.4	1	-0.3
L	-0.3	-0.2	-0.2	0.3	0.2	-0.3	0.5	0.3	0.3	0	0.1	-0.1	-0.1	0.3	-0.6	0.1	0.2	-0.3	1	-0.4
V	0.6	-0.2	-0.9	-0.2	0.1	-0.2	0.1	-0.3	0.4	-0.3	-0.1	-0.4	0.4	0.2	0	0.3	0.1	-0.6	0.9	0.2
M	0.6	-0.2	-0.1	-0.1	0.1	-0.2	-0.1	0.1	-0.2	0.1	-0.4	-0.1	0.3	-0.1	0.1	0.1	-0.3	0	-0.5	0.3
W	0.1	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	-0.2	-0.1	-0.1	-0.1	-0.1	0	-0.2	0.3	-0.1	-0.1
Y	-0.1	0.3	1	-0.1	-0.5	0	-0.3	0	0.4	0.2	0	-0.1	-0.1	0.1	0.2	-0.7	-0.2	0.9	-0.6	0.3
D	0	-0.2	-0.2	0.3	-0.2	1.1	-0.2	-0.1	-0.6	-0.1	0.3	0.3	-0.1	0.1	-0.1	0.2	-0.3	0.5	0	0
E	-0.2	0.4	0.1	0	0.7	0.6	-0.2	-0.3	0.1	0.6	0.2	0	-0.6	0	-0.3	0	-0.3	0.1	0.2	-0.7
K	-0.3	-0.4	-0.2	0	-0.1	-0.3	0.1	-0.1	0.4	0.7	-0.4	-0.2	-0.3	0.2	0.1	0.4	0.5	0	-0.3	0.2
R	0.5	-0.2	-0.4	0.4	0.2	-0.4	0.1	0.2	0.2	0.5	-0.1	-0.3	-0.2	-0.5	-0.1	0.4	0.3	0.6	-0.4	-0.4
H	-0.3	-0.1	-0.6	-0.1	-0.5	0.1	0	-0.5	0.2	-0.2	0.6	0.7	0	0.3	0.2	-0.2	0.3	0.3	-0.6	-0.2
N	-0.2	0.1	0.7	0	0.1	0.4	-0.2	0.1	-0.5	-0.2	0.3	0.2	0.5	0.1	0.2	-0.1	-0.5	0.2	-0.1	-0.7
Q	-0.2	-0.2	0	-0.1	0.2	-0.4	0	-0.3	0.1	-0.1	0.8	0.3	-0.1	-0.1	-0.2	0.2	0.2	0.1	-0.1	-0.2
S	0.1	0.3	0.5	0.1	-0.1	-0.2	0.3	0.2	-0.3	-0.1	0.1	0.2	-0.6	0	-0.3	0.2	-0.3	0.1	0	0.3
T	0	0.3	-0.6	0	-0.3	-0.6	-0.3	-0.1	0.3	0.3	0.1	0.1	0.3	0.4	0.8	0.2	0	0.1	-0.1	-0.5
G	0.4	0	0.2	-0.5	0.1	-0.2	-0.3	0.5	-0.3	0.4	0	0.4	-0.3	0.4	-0.2	0	-0.2	-0.1	-0.7	0.2
P	0.2	-0.3	0.3	-0.2	0.6	0.2	-0.3	0.2	0.1	0	-0.4	-0.3	0.4	0.1	0.4	0.1	0	-1.1	0.6	-0.2
C	-0.3	0.8	-0.2	0.3	-0.1	0.5	-0.1	-0.3	-0.2	-0.3	-0.2	-0.6	0	-0.6	0.1	-0.4	0.1	-0.6	0.2	1.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0060	0.7	-1	0.1	0.5	0.2	-0.6	-1.7	-0.8	1	0.3	0.5	0.5	-0.4	0.7	0.1	1	0.5	0.3	-0.2	-1
0064	0.5	-0.4	-0.5	0.2	-0.1	-1.3	-1.6	-0.8	1	0.8	0.4	0.1	-0.3	0.5	0.2	0.7	0.5	0.7	0.7	-1

Select residue pair below:

i_j	Score	Prob
0060_0063	1.682	1.00
0056_0060	0.880	0.84
0060_0064	0.635	0.50
0041_0060	0.543	0.34

Local Interactions:

i_j	Score	Prob
0060_0062	1.456	1.00
0060_0061	0.741	0.67
0059_0060	0.721	0.64

See all coupling residues
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