May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0057] and [G:0076]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0.1 -0.2 -0.4 -0.3 -0.1 0 0.2 -0.1 0.8 0.1 0.4 0.2 -0.1 -0.1 -0.2 -0.2 0 0.3 0
F 0.1 -0.5 0.1 0.2 -0.4 -0.1 0.1 -0.7 -0.1 0.4 0.1 -0.7 0.1 0.3 -0.3 0.5 -0.5 0.1 0.3 0.3
I 0.5 -0.1 0.2 0.1 0 -0.4 -0.2 -0.1 -0.1 0.3 0.3 -0.1 0.2 -0.2 0.3 -0.4 -0.3 -0.2 0 -0.1
L 0 -0.4 0.4 -0.1 -0.1 0.5 -0.1 -0.4 0 -0.1 -0.1 0.2 0 0.4 0.7 -0.2 -0.6 0.3 0 -0.1
V 0.4 0 0.1 -0.2 0.3 0.3 -0.3 0.1 0.2 0.1 -0.2 0 -0.2 -0.1 0.8 -0.2 -0.1 0 0.2 -0.7
M -0.3 1 -0.1 -0.6 0.1 -0.3 -0.1 0.3 0.2 0.4 0 0 -0.1 -0.1 0.1 -0.1 -0.3 -0.1 0.1 -0.5
W 0.2 -0.5 -0.2 0.6 0.7 -0.2 -0.1 -0.1 0.2 -0.1 0.2 -0.2 -0.2 -0.1 -0.2 0 -0.5 -0.1 -0.4 -0.2
Y -0.2 -0.5 0.1 0.2 -0.3 -0.1 -0.5 -0.6 0.9 0.6 0.5 -0.4 -0.2 -0.3 0.1 0.1 0 0 0.1 0.8
D -0.1 -0.3 0.2 0.2 0.9 -0.1 -0.2 -0.3 -0.4 -0.9 -0.6 0.5 0.2 -0.3 0.2 0.8 0 0 0.1 -0.2
E -0.2 0.1 0.2 -0.2 0.5 0.6 0.3 -0.1 -0.1 -0.7 -0.1 0 -0.4 0.2 -0.5 0.5 0.4 -0.2 -0.6 0.2
K -0.2 -0.1 -0.3 0 -0.7 -0.2 0.1 0.2 0.2 0.5 -0.7 0.3 -0.4 0.2 -0.1 0.5 1 -0.2 -0.1 0.2
R 0.1 -0.1 -0.1 0 0.2 0.2 0.8 0.2 -0.3 0.2 -0.4 -0.7 0.1 -0.2 0 -0.2 -0.2 0.3 0.2 0.1
H 0 0.1 0.2 0.1 0 -0.2 0.4 0.3 -0.6 -0.7 0.2 0.1 -0.2 0 0 0 0.1 -0.1 0.6 0.2
N -0.6 0.1 -0.3 0.5 -0.1 -0.5 -0.2 -0.3 0.2 0 0.4 0.6 -0.6 0.1 0.2 0.5 0.4 -0.6 -0.5 0.5
Q -0.2 0.3 0.5 0.1 0.2 0.5 -0.3 0.1 0.1 0.2 -0.3 -0.3 -0.1 0.2 -0.5 -0.6 0.2 -0.1 0.1 -0.1
S -0.1 -0.1 -0.3 0.1 -0.5 -0.4 -0.3 0.4 0 0.1 0.1 -0.2 0.2 0.3 -0.2 0.4 0.2 0.6 0.1 -0.3
T 0.7 -0.5 -0.1 -0.3 0.3 -0.3 -0.4 0.2 -0.2 -0.6 0 0.6 0.2 -0.3 0.1 0.3 -0.1 0.1 -0.3 0.5
G 0.5 0.1 -0.6 -0.5 -0.3 0.9 0.3 -0.1 -0.2 0.2 0 0.5 0.5 0.1 -0.7 -0.5 0.3 0 -0.5 -0.3
P 0 0.8 -0.4 0.3 -0.4 0.1 0 0.1 -0.1 -0.4 0.2 -0.3 -0.2 -0.1 -0.3 -0.5 0.7 0.3 0.2 -0.1
C -0.5 0.6 0.4 -0.1 0.3 -0.5 -0.2 0.3 -0.2 0.3 0.2 -0.2 -0.2 0.1 0.4 0 0.1 0.2 -0.2 -0.3

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0057 0.4 0 0 0.5 0.4 -0.6 -1.3 -0.2 0 0.4 0.1 0.7 0.5 -0.2 0.6 0.4 0.1 -0.1 -0.8 -0.2
0076 0.5 -0.4 0.2 0.4 0.4 -0.9 -1.8 -0.7 -0.1 0.6 0.6 0.1 -0.4 0 0.1 0.9 1 0.2 -0.4 -0.6
Select residue pair below:
i_j Score Prob
0057_0076 0.970 0.91
0045_0057 0.943 0.89
0050_0057 0.938 0.89
0047_0057 0.725 0.65
0057_0073 0.569 0.39
Local Interactions:
i_j Score Prob
0055_0057 1.203 0.98
0057_0059 0.926 0.88
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.014 seconds.