May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0057] and [C:0073]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.5 -0.5 0.5 -0.4 0.6 -0.2 0.3 -0.2 0 -0.5 0.2 0.4 0 0 0.4 0.2 0.3 0.3 -0.4
F 0.1 0.4 1.2 0.2 0.2 0 -0.1 -0.1 -0.3 0.1 0.2 0.1 0.2 -0.3 -0.3 -0.1 -0.4 -0.2 -0.7 -0.2
I 0.2 0.1 0.7 -0.6 0.1 -0.6 0.9 0.3 0.1 -0.3 0.8 0.3 0.1 -0.2 0.1 0.1 -0.1 -0.7 -0.3 -0.6
L -0.1 -0.1 0.1 0.1 0.3 0 -0.1 -0.1 -0.1 0.4 0.1 0.2 0.1 -0.1 -0.5 -0.2 0.2 -0.1 0.2 -0.4
V 0.1 -0.6 -0.1 -0.3 0.3 0.2 -0.3 -0.5 0.1 0.3 0.4 0 -0.5 -0.3 0.2 0.4 0.3 0.6 0.1 -0.3
M 0.7 -0.2 -0.3 -0.1 0.1 0 -0.2 -0.3 -0.5 0.2 -0.5 0 -0.1 0.1 0 -0.1 0.2 0.3 -0.2 0.6
W 0.3 -0.2 -0.4 0.3 0.1 0.4 -0.1 0.1 -0.2 0.2 -0.4 0.1 0.4 -0.2 -0.2 -0.3 -0.4 -0.1 0.2 -0.5
Y -0.5 0.4 0 0.2 0 0.6 0.1 -0.4 -0.1 0.3 0.3 -0.4 -0.1 -0.7 0.3 -0.4 -0.5 0.7 -0.7 0.3
D 0.2 0.3 0.2 0.3 0.9 -0.3 -0.2 0 -0.3 -0.8 -0.1 0 0.5 0.1 0.3 0.5 0.1 -0.1 -0.5 -0.8
E -0.2 -0.4 0.2 0.6 0.3 0.3 0 -0.2 -0.4 -0.9 0.3 0.1 0.4 -0.1 0.8 0.1 0.2 -1 0.5 0.1
K -0.1 0.2 0 0.3 0.3 -0.3 -1 0.7 -0.2 0.7 0.2 -1.2 -0.5 -0.2 0.2 0.6 -0.1 -0.6 0.2 1.2
R 0 0.4 -0.1 0.4 -0.1 0.4 -0.3 0.7 -0.2 0.2 -0.4 -0.7 -0.1 -0.3 0.1 0.1 -0.2 -0.4 0.1 0.7
H 0.6 -0.4 -0.3 0.1 0 -0.4 0.3 -0.4 0.5 0.4 0 -0.2 -0.2 -0.2 -0.1 -0.1 0 1 0 -0.4
N -0.1 0.2 -0.3 0.2 -0.4 -0.6 0.1 -0.3 -0.3 -0.9 0.4 1.1 0.1 0.4 -0.5 0.1 -0.1 0.7 0 -0.5
Q -0.3 0.5 0.4 0.1 0.3 -0.2 -0.3 -0.2 0 -0.3 0.2 0 -0.1 0.2 -0.2 -0.5 -0.1 0.3 0 0.5
S 0 -0.1 -0.4 -0.1 -0.4 -0.2 -0.5 -0.4 0.8 0.7 0.2 0.5 -0.4 0.2 0 0 0.2 -0.1 0.2 0.2
T -0.2 -0.1 0.2 -0.1 0.6 0.1 -0.1 -0.1 0.1 0.5 -0.3 0.5 -0.8 0.2 0.4 -0.1 0.3 0 -0.1 -0.9
G -0.1 -0.7 0.5 -0.2 -0.2 -0.2 0.3 0.7 -0.2 -0.7 -0.5 -0.5 0.4 1 -0.3 0.1 0.5 0 0.1 0.3
P -0.2 0 -0.3 -0.5 -0.5 -0.2 0.2 0.1 0.5 0.2 -0.3 0.2 0.4 -0.2 -0.1 -0.4 -0.2 -0.2 -0.3 1.2
C -0.1 -0.4 -0.6 -0.2 -0.5 0.1 0.6 -0.4 0.2 -0.2 0.1 0.3 -0.2 0 -0.3 0 -0.1 -0.7 0.9 0.7

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0057 0.4 0 0 0.5 0.4 -0.6 -1.3 -0.2 0 0.4 0.1 0.7 0.5 -0.2 0.6 0.4 0.1 -0.1 -0.8 -0.2
0073 0.4 -0.6 0.4 1.1 0.8 -0.7 -2 -1.1 -0.8 0.2 0 0.1 -0.4 -0.5 0.1 0.4 0.1 -0.5 0.4 0.4
Select residue pair below:
i_j Score Prob
0073_0076 0.710 0.62
0057_0073 0.569 0.39
Local Interactions:
i_j Score Prob
0073_0075 0.566 0.38
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0136 seconds.