OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [A:0055] and [G:0056]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0	0.6	0.1	0.1	0.2	0.2	-0.2	0	0.1	-0.3	0	0	0	0	-0.2	-0.1	0.2	-0.1	0.1	-0.4
F	0.3	-0.3	0	0	-0.1	0.6	0.4	0	-0.1	-0.1	0.1	-0.1	-0.1	-0.2	0.2	0	-0.7	0.7	-0.5	-0.4
I	0	0.7	0.1	0.1	0.1	-0.3	-0.2	-0.2	-0.1	0	-0.1	0.2	0.5	0.1	-0.1	-0.1	0.1	-0.4	-0.5	-0.6
L	0.3	0.3	-0.1	-0.2	0.2	-0.3	0.5	-0.1	-0.3	-0.3	-0.2	0	-0.2	-0.2	0.4	-0.1	0.3	0.4	-0.6	0.3
V	0.4	1.1	-0.2	0	0.2	0.2	0	-0.2	0.2	0.1	-0.1	-0.1	-0.2	-0.2	-0.2	-0.5	-0.5	-0.2	0.1	0.3
M	0.2	-0.1	0.1	0.7	0.1	0.9	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	-0.2	0	-0.4	-0.5
W	-0.7	-0.3	-0.2	0.2	-0.4	0.1	0.2	-0.1	0	0	0	0	0	0	0	-0.2	0	0.9	0.1	-0.3
Y	0.2	-0.4	0.6	0.2	0.1	0.6	-0.1	0.8	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	-0.5	-0.9	-0.2	0.2
D	-1	-0.2	0.2	-0.5	0	-0.4	-0.1	0.6	0.2	0.1	-0.2	0.3	0	0.6	-0.1	1.1	-0.2	0.3	-0.4	-0.2
E	-0.2	-0.2	0.5	0.2	0.4	0.3	0.1	-0.2	-0.2	1.4	0	-0.2	0	-0.3	-0.1	0.4	0.6	-0.7	-0.2	-0.8
K	0.4	-0.6	0.3	0.1	0.3	-0.6	0.3	-0.3	0.1	-0.4	-0.1	-0.2	-0.3	0.2	0.3	0	0.2	0.4	0.7	0
R	0.1	0	0.3	0.2	0.4	-0.2	0	-0.3	-0.1	-0.2	0.1	0	0.3	0	-0.1	-0.5	0.1	0.2	0.3	0.1
H	0.4	-0.4	0.6	0.1	0.5	-0.4	-0.1	-0.1	-0.2	0	-0.2	-0.2	0.1	-0.3	0.1	-0.5	-0.8	-0.3	0.5	1.1
N	-0.5	-0.4	0.2	-0.3	0.2	0.1	-0.2	-0.4	-0.3	-0.1	-0.1	-0.2	0.2	0.4	-0.1	0.3	0.3	1.9	-0.2	0.1
Q	0.2	0.3	0.6	0.9	0.2	-0.1	-0.1	-0.1	-0.2	-0.2	0.2	-0.2	-0.2	-0.1	-0.2	-0.5	-0.3	0.6	0.7	-0.9
S	0.2	0.6	0.4	0.3	0.3	-0.1	0	0.4	0	-0.4	0.2	0	-0.5	-0.1	-0.1	0.1	0.3	0	-0.3	0
T	1.1	0.1	0.4	0.1	0.6	0	-0.7	-0.2	-0.3	-0.5	-0.3	-0.1	0	-0.8	-0.3	0.9	1.5	-0.7	-0.3	0.7
G	-0.2	0.1	-0.5	-0.2	-0.2	-0.3	-0.1	0.6	-0.2	0	0.1	0.1	0.1	0.1	-0.1	0.5	0	1	-0.1	-0.2
P	-0.1	-0.4	-0.7	-0.2	-0.7	0.2	0	-0.1	0.2	0.2	-0.1	0.2	0	-0.1	0.2	0.3	-0.2	-0.2	1.4	-0.2
C	-0.1	0.3	0.1	0.1	0.6	0	-0.1	0	-0.1	-0.1	-0.1	0.1	-0.1	0.7	0	-0.3	-0.4	-0.8	-0.3	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0055	0.6	-0.6	-0.1	0.4	0.5	-0.6	-1.4	-0.7	0.6	0.4	0.2	0.5	-0.3	0.5	-0.1	0.7	0.5	0.4	-0.6	-0.9
0056	0.8	0.5	2	2.4	2.2	0.3	-1.1	-0.5	-0.8	-0.9	-1	-1.1	-1	-0.8	-1.3	0.1	0.1	1	-0.4	-0.4

Select residue pair below:

i_j	Score	Prob
0050_0055	1.495	1.00
0047_0055	0.953	0.90

Local Interactions:

i_j	Score	Prob
0055_0057	1.203	0.98
0055_0056	0.591	0.42

See all coupling residues
Download raw data

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