May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0050] and [S:0057]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.3 -0.2 0.1 0.2 0.3 0.7 -0.2 0.3 0.1 -0.2 -0.5 -0.3 -0.4 0.3 -0.3 0.3 -0.1 -0.2 0.3
F -0.2 0 -0.5 -0.8 -0.6 -0.4 0 1.5 -0.2 0.3 0.4 0.6 0.2 -0.9 -0.3 0.2 -0.5 -0.1 0.7 0.6
I -0.1 -0.5 -0.6 0.5 0.4 0.2 -0.1 -0.3 -0.2 0.2 -0.3 -0.6 0.1 0.3 0.4 -0.5 -0.3 0.8 0.1 -0.1
L 0.1 -0.6 -0.7 1 -0.1 0 -0.2 -0.1 0.5 -0.1 0 0.1 -0.6 0.4 0.2 -0.5 -0.3 0.5 0.2 0
V 0.6 -0.6 -0.2 0.5 0 -0.1 0.1 -0.5 0.3 -0.6 -0.5 -0.1 0.1 -0.5 0.2 0.2 -0.1 1 -0.1 0.1
M 0 0 -0.5 0.1 -0.3 -0.1 -0.1 -0.2 0 -0.5 -0.3 0.3 -0.1 -0.2 -0.1 0.3 -0.3 0.8 0.1 0
W -0.2 0.1 0.4 -0.1 -0.2 -0.1 0 0 -0.1 0 0 0 -0.2 0 -0.1 0 -0.2 0.1 0 -0.2
Y -0.1 -0.2 -0.8 -0.1 -0.7 -0.3 -0.2 0.5 0 -0.3 0.9 0.7 -1 0.2 0.1 -0.1 -0.2 0.7 -0.2 0.2
D 0.3 0 0.6 0 0.2 0.5 0 0.3 -0.7 -0.1 0.8 1 0.1 0.3 -0.7 -0.1 -0.2 -0.3 -1 0.3
E -0.1 -0.3 0.4 0.1 0.2 0.2 0.2 0.4 -0.3 -0.2 -0.1 -0.1 0.1 -0.2 -0.4 0.1 -0.1 0.7 0.1 -0.1
K -0.4 1.2 0.6 -0.1 -0.2 -0.3 -0.2 -0.3 -0.5 -0.1 -0.3 -0.5 0.8 0.4 0.1 -0.2 -0.3 -0.2 0.4 0.2
R -0.2 1.4 1 -0.2 0 -0.5 -0.1 -0.8 -0.1 0.2 -0.4 -0.1 0.4 0.1 0.5 -0.4 -0.4 -0.4 0.8 -0.6
H 0.1 0.1 -0.2 -0.7 0 0 0 0.4 0.2 -0.5 -0.5 0 0 1 -0.2 0.8 -0.2 0.6 -0.2 -0.6
N 0.4 0.3 0.1 0 0.5 0.3 -0.5 0.1 -0.1 0.6 -0.1 -0.2 0 0 0.1 0.2 0.2 -0.8 -0.4 0.2
Q -0.1 0.1 0.1 -0.1 0.6 -0.4 -0.1 -0.7 0.2 0.6 0 0.1 0.8 0.4 -0.3 -0.2 -0.3 -0.5 -0.2 0.2
S -0.1 0.1 0.3 0.2 0.6 -0.1 -0.5 0 0 -0.2 0.3 0.2 0.5 -0.3 0.2 0.6 0.3 -1.4 -0.4 0.1
T 0.3 -0.1 -0.2 0 -0.1 0.1 -0.1 -0.5 1 0.4 0.3 -0.1 0 -0.4 0 0.3 0.2 -0.3 0.1 -0.2
G 0.2 -0.3 0 0.5 0.4 0.3 0.4 -0.6 0.2 0.5 -0.1 0 -0.1 -0.4 0.1 -0.3 0.4 -0.7 0 0
P 0.3 -0.5 -0.3 -0.1 -0.8 -0.2 0.2 -0.6 -0.1 0.5 -0.5 -0.6 -0.3 -0.1 0.6 0.1 1.7 0.1 -0.2 -0.5
C -0.5 0.2 0.4 -0.6 0.2 -0.1 0 0.4 -0.2 -0.4 0.3 -0.5 -0.1 0.1 -0.2 0.2 0.2 0 -0.1 0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0050 0 -0.2 -0.8 -0.8 -0.8 -1.2 -1.4 -1 2 0.6 0.4 0.2 -0.5 0.8 -0.3 0.8 0.5 1.2 -0.4 -1.1
0057 0.4 0 0 0.5 0.4 -0.6 -1.3 -0.2 0 0.4 0.1 0.7 0.5 -0.2 0.6 0.4 0.1 -0.1 -0.8 -0.2
Select residue pair below:
i_j Score Prob
0050_0055 1.495 1.00
0047_0050 1.220 0.98
0050_0057 0.938 0.89
Local Interactions:
i_j Score Prob
0049_0050 1.957 1.00
0050_0051 1.241 0.98
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0176 seconds.