OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [S:0047] and [L:0049]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.8	0.2	-0.1	-0.1	0.1	0.1	-0.8	0.1	0.6	0.1	-0.1	-0.1	0.2	0	0	0.3	0.6	-0.1	-0.4	0
F	-0.8	-0.6	-0.2	-0.3	0	-0.5	-0.3	-0.3	0.3	0.2	-0.5	-0.6	0	1	-0.7	0.7	1	0.5	0.2	-0.1
I	0.3	0.2	0	0.2	-0.1	1	-0.2	0	-0.3	-0.2	0.6	0.1	0	0.1	-0.2	-0.3	0	-0.4	-0.2	-0.1
L	-0.7	0.3	0.2	-0.9	-0.3	-0.4	-0.5	1.9	0.4	-0.5	0.3	-0.1	-0.2	0.9	-0.5	-0.2	-0.1	0.3	-0.4	-0.3
V	0.9	-0.5	0.1	-0.2	-0.2	0.2	-0.2	-0.5	0.8	0.1	0.2	-0.6	0.1	0.3	0.1	0.7	0.1	0	-0.1	-0.3
M	0	-0.2	-0.2	-0.3	0	0	0	0.7	0	-0.1	0.9	-0.2	-0.3	0.5	-0.3	-0.5	0	-0.3	0.3	0
W	-0.2	-0.1	-0.1	0.4	-0.1	-0.1	-0.1	-0.1	-0.4	0	-0.1	0.1	-0.1	-0.1	-0.1	0.2	0.1	-0.2	0	0
Y	-0.2	0.6	0.9	0.3	0.5	0.2	-0.5	-0.5	0	-0.6	-0.1	-0.3	-0.3	-0.1	-0.3	0.1	-0.1	-0.6	-0.1	0.9
D	0.6	-0.7	0	-0.2	0.7	-0.2	-0.2	-1.1	-0.9	-0.1	0.1	0.1	0.1	-0.3	0.2	0.6	0.3	0.1	-0.4	0.1
E	0	0	0.4	-0.4	0	-0.1	-0.1	-0.1	-0.5	-0.4	-0.4	-0.5	-0.1	-0.1	0.2	-0.1	0.6	0.1	0.6	-0.1
K	-0.4	-0.1	-0.1	1.1	-0.1	0	-0.1	-0.2	-0.7	0.5	-0.4	-0.4	0.2	-0.3	0.2	0	-0.1	-0.2	0.1	-0.1
R	0.8	-0.2	-0.2	-0.1	-0.5	-0.6	-0.3	-0.8	0.1	0.9	-0.5	-0.2	-0.5	0.1	0.4	0.7	-0.2	0.4	0.2	-0.2
H	0.4	-0.3	-0.3	0.1	-0.2	-0.2	-0.2	0.3	-0.5	-0.2	-0.2	0.1	0	0.3	0.6	-0.2	-0.2	-0.2	0.1	0.1
N	-0.3	-0.4	-0.5	0.1	0.7	-0.3	-0.2	0.2	-0.5	0.3	0.5	0.6	-0.3	-0.4	0	-0.5	0	-0.4	0.8	0.1
Q	-0.2	-0.1	0.1	-0.2	0.1	-0.1	-0.2	-0.3	0	-0.4	0.3	0.2	0	0.2	0.2	-0.6	-0.3	0.4	0.2	0
S	-0.6	0.5	-0.2	0.2	-0.6	-0.5	0.8	0.4	1	0.1	-0.1	0.7	0.2	-0.1	0	0	-0.2	0	-0.6	0
T	0.8	0.3	-0.4	-0.3	-0.1	0.7	0.3	-0.7	0	-0.3	-0.8	0.4	-0.1	-0.2	0.1	0.4	0.1	-0.2	-0.6	0.3
G	-0.3	0.3	0.2	-0.2	-0.5	-0.3	-0.5	1	0.6	0.2	0.6	0	0.5	-0.2	0.1	-0.3	-0.5	0.8	0	-0.1
P	0.3	-0.1	-0.1	-0.3	-0.1	0.1	-0.1	-0.2	0.4	-0.4	-0.2	0.2	0.1	-0.4	0	0.1	-0.3	-0.4	0.1	-0.1
C	-0.6	-0.1	-0.7	0.4	0.7	-0.4	-0.5	-0.7	0.5	0	0.6	1.3	0.4	0	0.2	-0.3	-0.1	0.1	0.4	-0.5

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0047	1.1	-1.1	0.2	-0.3	0.3	-0.2	-1.3	-0.4	-0.3	-0.3	-0.9	-0.8	-0.4	0	0	1.8	0.6	1.8	-0.9	0.5
0049	0.5	-0.8	-0.7	0.3	-0.6	-0.1	-1.8	-0.2	0.7	0.3	0.5	-0.1	-0.6	0.6	-0.2	0.9	0.4	0.5	-0.8	-1.4

Select residue pair below:

i_j	Score	Prob
0045_0049	0.639	0.50

Local Interactions:

i_j	Score	Prob
0049_0050	1.957	1.00
0047_0049	0.701	0.61

See all coupling residues
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