OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [L:0042] and [L:0044]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	0.7	0.1	0.2	0.1	-0.3	-0.1	-0.2	0	-0.1	0	0.7	-0.1	-0.1	-0.1	-0.2	-0.5	0.3	-0.1	0.6
F	0.2	-0.1	-0.1	-0.1	-0.1	-0.3	-0.5	0.5	0.2	-0.1	-0.1	-0.2	-0.2	-0.2	-0.1	0.1	0.1	0.5	-0.1	1.1
I	0.3	-0.3	-0.7	-0.8	-0.1	-0.2	-0.2	0.1	-0.1	-0.1	-0.1	0.9	-0.2	0.5	0.2	0.1	0.5	0.5	-0.1	0.1
L	0.5	0.4	-0.5	-0.2	-0.1	-0.1	-0.8	0.2	-0.2	0	-0.2	0.2	-0.2	-0.4	0.1	0.2	0.3	0.6	-0.5	0.6
V	0.3	-0.3	-0.6	-0.5	-0.4	0.5	0.2	-0.3	0	0.1	-0.1	-0.3	0.3	-0.1	0	0.5	0.1	0.1	0	0.1
M	0.6	-0.4	-0.3	-0.3	-0.1	0.1	-0.2	-0.5	0	0	0	0.1	0.2	-0.1	-0.1	0.6	-0.3	0.2	-0.1	0.1
W	0.9	-0.3	-0.7	0.1	-0.1	0.3	-0.2	-1.1	0	-0.1	0	-0.1	-0.1	0.1	-0.1	0.2	0	1	0.3	-0.4
Y	0.3	-0.4	0	0.2	-0.3	0.1	0.3	-0.3	-0.1	-0.2	-0.1	-0.3	0.2	-0.2	0.1	0.4	0.2	0.1	-0.3	0.3
D	-0.9	0	0.9	0.4	0.6	-0.1	-0.1	-0.5	0.2	0	0.1	-0.1	-0.1	-0.1	0	-0.1	-0.2	-0.3	-0.1	0.2
E	-1.1	0.2	-0.3	0.3	0.1	0.2	0.1	-0.4	0	0.2	-0.1	0.1	-0.1	-0.1	-0.1	0.5	0.7	-0.4	0.2	0.1
K	0.3	0.1	0.5	0	0.6	-0.5	-0.2	0.6	0	-0.1	0.2	-0.2	0.1	-0.1	-0.1	-0.2	-0.1	-0.2	-0.1	-0.7
R	0.5	0.2	0.5	-0.1	0.5	0	0.7	0.1	-0.1	-0.1	-0.1	-0.1	0	0.2	0	-0.5	0	-0.3	-0.3	-0.2
H	0	0.3	0	0.2	0.2	-0.1	0.5	0.8	-0.1	-0.1	0.2	-0.1	-0.1	-0.1	-0.1	0.1	-0.3	-0.6	-0.2	-0.6
N	-0.6	0.3	0.9	0.5	0.2	-0.2	-0.1	0.2	0	0.2	0	0	-0.1	-0.1	-0.1	-0.2	-0.5	-0.3	0.2	-0.4
Q	0	0.6	0.3	-0.1	0.1	0	0	0.2	0	-0.1	-0.1	0.1	-0.1	-0.1	-0.1	-0.1	-0.2	-0.1	0.1	-0.6
S	-0.2	0.1	0.4	0.2	0	0.4	0.2	0.3	-0.1	0.2	0.2	-0.1	-0.1	0.4	-0.1	-0.3	-0.4	-0.5	0.1	-0.5
T	0.4	0.1	-0.1	-0.5	-0.1	-0.2	0.2	0.6	-0.1	-0.1	-0.1	-0.2	-0.2	-0.2	-0.1	-0.3	0.1	-0.1	0.2	0.4
G	-0.4	0.1	-0.3	0	0	-0.4	0.2	-0.6	0	0	0	-0.1	0.2	0.2	0	0.1	1.8	-0.3	-0.1	-0.1
P	-0.5	-0.8	0.5	0.7	0.1	1.3	-0.1	-0.4	0	0.2	0	-0.1	-0.1	0	-0.1	-0.3	-0.4	0.1	-0.1	-0.2
C	0	0.1	0.1	0.6	-0.3	-0.1	-0.1	-0.2	0	0	0	-0.1	0	-0.1	0.5	-0.4	-0.4	-0.2	0.5	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0042	0.2	0.3	0.8	1	0.8	-0.8	-0.8	0.3	-0.5	-0.2	-0.5	0.2	0	-0.4	-0.3	0.6	0.1	-0.2	-0.6	-0.6
0044	-0.3	0.4	1.6	2	1.5	0.4	-0.2	0.1	-1	-0.7	-0.9	-0.1	-0.3	-0.6	-0.6	0.3	0.3	0	-0.2	-0.7

Select residue pair below:

i_j	Score	Prob
0037_0042	0.819	0.78
0042_0058	0.815	0.77
0042_0045	0.633	0.49

Local Interactions:

i_j	Score	Prob
0041_0042	1.355	0.99
0042_0044	0.955	0.90
0042_0043	0.742	0.67

See all coupling residues
Download raw data

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