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Coupling matrix for [G:0040] and [A:0041]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.3 0 -0.1 -0.1 -0.8 -0.2 0.1 0.4 -0.1 0.3 0.3 0.4 -0.1 0 0.4 0.2 0.3 -0.4 0
F 0.5 -0.2 -0.1 -0.6 -0.4 -0.3 0.2 -0.3 -0.5 -0.5 0.3 -0.3 -0.2 -0.4 -0.4 0.4 -0.6 0.9 1.1 -0.2
I -0.7 -0.2 0 -0.1 -0.3 0 -0.1 -0.2 0.1 0 0.5 0 0.1 0.3 0.2 -0.1 -0.5 0.1 0.3 -0.2
L -0.1 0 -0.5 -0.7 -0.1 0 -0.1 -0.2 0.5 0.5 0.2 0.1 0.3 0.4 0.1 -0.1 -0.6 -0.2 0.8 -0.4
V 0.6 -0.2 0.1 -0.6 -0.1 -0.2 -0.1 0 -0.2 -0.2 0.4 -0.3 -0.2 -0.2 0 0 -0.3 0.6 0.8 -0.2
M -0.2 -0.1 -0.2 -0.2 -0.4 -0.1 0 -0.2 0.1 -0.2 0.5 0.8 0.2 -0.2 -0.4 -0.3 1.1 -0.3 -0.1 0
W -0.2 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.2 0 0.5 -0.2 0.1 -0.1 -0.3 -0.2 -0.3 0.3 0 0
Y 0 0 0 -0.2 0.1 -0.4 -0.1 -0.1 -0.8 0.2 -0.1 0 -0.3 0.1 -0.4 -0.2 -0.2 0.1 1.1 0
D 0.3 0.3 0.4 0.5 0.1 0.3 -0.4 -0.1 0 0.3 -0.2 0.3 -0.2 -0.1 0.1 0.1 0.4 -0.2 -0.9 0.3
E -0.3 0 -0.8 0 0.2 0.7 -0.3 0.2 0.7 0.8 0 -0.4 -0.4 0.1 0.1 0.1 0 -0.4 0.8 -0.3
K -0.4 0.3 0.5 0.2 0.8 -0.5 -0.2 -0.1 0.2 0.1 -0.1 0.1 -0.4 -0.1 -0.1 -0.2 -0.1 -0.1 -0.2 0.1
R -0.3 -0.1 -0.1 -0.4 -0.3 -0.2 -0.1 -0.3 0.2 -0.1 -0.1 0.7 -0.4 0.2 0.3 0 0.1 0.1 0.6 0.3
H 0.3 -0.6 -0.2 -0.2 0.4 0.4 0.3 0.1 0.1 -0.4 -0.8 -0.5 0.2 -0.2 0 0.2 -0.2 -0.2 0.8 0.1
N -0.1 0.3 1 0.7 1.1 0.6 -0.4 0.4 -0.4 0.2 -0.3 -0.2 0.1 -0.2 0.2 -0.4 0.1 -0.8 -0.3 0.2
Q 0.3 -0.3 0.6 -0.6 -0.7 -0.3 -0.2 -0.2 0 0.3 -0.4 0 -0.2 0.5 0 0 0 0.4 0.9 -0.2
S 0.4 0.2 -0.3 0.4 -0.3 -0.1 -0.1 -0.2 0.2 0.2 0.3 0.2 -0.3 0.2 0.7 0.3 0.4 0.1 -0.8 0.1
T 0.1 0.1 -0.4 -0.1 -0.1 -0.1 0 -0.2 0.1 -0.3 0 0.1 0.6 0.2 0.1 0.3 0.1 0.2 -0.4 0.4
G 0.4 0.6 -0.4 0.1 -0.5 -0.3 0.3 0.5 0.6 0.3 0.3 0.5 0.4 0.1 0.1 0.4 0.5 -0.1 -1.9 -0.6
P -0.3 0 0.3 0.9 0.7 0.4 -0.1 0.6 -0.2 -0.3 0.1 0 -0.1 -0.1 0.1 0 0.1 -0.3 -0.9 -0.1
C -0.2 -0.2 -0.3 0.6 -0.5 0 0 -0.3 0.1 -0.3 -0.2 0 0.6 0.1 1.1 0 0.1 -0.2 -0.3 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0040 0.4 -0.9 -1 -0.2 -0.9 -1.2 -2.2 -0.5 1.3 0.6 0.4 0 0 1.4 0.2 1.4 0.6 2 -0.1 -1.1
0041 0.3 -1.5 -0.9 -0.2 -0.5 -1 -1.9 -1 1.2 0.7 0.7 0.8 0.3 0.8 0.5 0.9 0.3 0.7 1.1 -1.1
Select residue pair below:
i_j Score Prob
0037_0041 1.112 0.96
0041_0062 0.823 0.78
0041_0060 0.543 0.34
Local Interactions:
i_j Score Prob
0039_0041 1.970 1.00
0041_0042 1.355 0.99
0040_0041 1.022 0.93
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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