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Coupling matrix for [Y:0036] and [F:0061]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.2 -0.5 0.1 -0.4 -0.4 0.2 -0.4 0.4 -0.2 0 0.3 -0.3 0.6 0.5 -0.2 -0.1 0.5 0 -0.1
F 0.3 0.1 0.1 0.1 0.8 0.2 0.2 0.5 -0.4 -0.7 0.1 0.1 -0.3 -0.1 -0.6 0.1 0.4 -0.4 -0.3 0.6
I -0.6 0.2 0.3 0.5 -0.1 0.5 0.2 -0.3 0.3 0.5 0 0 0 0.4 -0.5 -0.3 -0.1 0 -0.9 0.2
L -0.3 0.9 0 0.3 0.5 0.2 -0.1 0.4 0.2 -0.5 0.1 0.3 0.3 -0.1 0 -0.1 0.5 -1 -0.4 -0.2
V -0.3 0.3 0.1 0.5 0 0.1 0 -0.2 -0.3 -0.1 0.2 0.1 -0.1 0 0.2 -0.2 0.4 -0.2 -0.4 0.1
M -0.1 0.1 0.1 0.3 0.3 0.3 0.5 0 -0.3 -0.3 -0.1 -0.1 -0.1 0.2 -0.2 -0.5 -0.3 0.4 -0.5 0.6
W 0.6 0.2 -0.1 0.3 0.2 0.1 -0.9 -0.3 0 0.4 0.4 -0.1 -0.4 -0.8 0.2 0.7 0.1 0.3 0.4 -0.3
Y 0.5 -0.5 0 -0.3 0.3 0.1 0 -0.1 0.1 0.2 -0.1 -0.5 0.2 -0.1 -0.5 0.5 0.5 0.7 -0.4 -0.3
D -0.3 -0.3 -0.3 -0.2 0.1 -0.1 0.1 0.3 0 0.2 -0.1 -0.1 0.2 -0.1 0.2 -0.2 -0.3 -0.1 0.5 -0.1
E 0.1 -0.2 0.2 0.1 -0.4 -0.1 -0.2 0 0.2 -0.1 0.1 0.1 -0.1 -0.1 0.4 -0.2 0.1 0.1 -0.3 -0.1
K -0.3 -0.4 0.5 -0.1 -0.6 0.6 0.1 -0.4 -0.1 0.2 -0.2 -0.2 0 -0.2 -0.1 0.2 0.2 0.1 0.3 -0.1
R 0.6 -0.3 0.2 0.3 0.2 -0.4 -0.1 -0.6 0.1 -0.1 -0.3 -0.2 0.2 -0.1 -0.1 -0.5 -0.5 0.4 0.9 -0.3
H -0.1 -0.4 0.1 0.2 -0.2 -0.4 0.2 0.1 0 -0.1 0.1 -0.5 -0.2 -0.1 -0.3 0.8 0.2 -0.3 0.3 -0.3
N -0.4 0.5 -0.2 -0.7 -0.3 -0.3 0.7 0.9 -0.1 -0.2 -0.2 0.1 0.3 0.2 -0.1 -0.4 -0.3 -0.2 -0.3 0.5
Q 0.1 -0.1 -0.3 -0.5 -0.1 -0.3 -0.5 -0.1 -0.1 0.7 -0.2 -0.1 0.2 -0.2 -0.1 0.4 0.3 0 0.7 0.2
S 0.2 0.2 0 -0.5 -0.2 -0.5 -0.1 -0.5 0.6 0.2 0.4 0.7 -0.5 0 0.3 -0.1 -0.3 0.2 0 0.1
T 0.1 -0.2 0.1 0.2 0.3 0.1 -0.7 -0.2 -0.2 0 -0.1 0.1 -0.2 0.7 0.1 -0.1 0.1 0 0.1 -0.1
G -0.1 0.2 -0.6 -0.3 0 0.1 -0.2 0.2 -0.1 -0.2 0.1 0.3 0.1 0.1 0.3 0.1 -0.3 0 0.2 0.2
P 0.1 -0.2 0.2 0.2 0 0.3 -0.1 -0.2 -0.1 -0.3 0.1 -0.6 -0.1 -0.3 0 0.1 0.7 -0.1 0.4 -0.1
C -0.1 0.5 0.7 0 0.1 -0.1 0 0.9 -0.2 0.3 -0.4 0.1 0.1 0.3 0.1 -0.2 -0.5 -0.4 -0.4 -0.6
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0036 0.3 1.4 0.6 1 1.1 0 0.4 0.3 -1 -0.8 -0.5 -0.3 -0.5 -0.6 -0.6 0.2 0.5 -0.5 -0.3 -0.2
0061 0.4 0.7 0.7 1.5 0.7 -0.2 -0.5 0.3 -0.7 -0.4 -0.7 -0.1 -0.7 -0.2 -0.6 0.3 0.6 -0.3 0.4 -0.3
Select residue pair below:
i_j Score Prob
0043_0061 0.835 0.80
0036_0061 0.790 0.74
0061_0064 0.647 0.52
Local Interactions:
i_j Score Prob
0061_0062 0.847 0.81
0060_0061 0.741 0.67
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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