OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [M:0027] and [G:0045]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0	0.1	-0.1	0.1	0.1	-0.1	0.1	0	-0.1	0.2	-0.1	0	-0.1	-0.1	-0.5	0.4	0.2	0	0.2
F	0.2	0.4	0.5	0.2	0.3	-0.1	-0.1	0.5	-0.1	-0.1	-0.1	-0.3	0.1	0.1	0.5	-0.7	-0.4	0.3	-0.1	-0.2
I	0.3	0.3	0.5	0.2	0.5	0.1	-0.1	-0.1	-0.1	0.1	-0.1	0.1	-0.1	-0.1	-0.2	0.1	-0.4	0.2	-0.1	-0.4
L	0.2	-0.1	0.4	0.2	0.4	0.2	0	0.4	0.1	-0.3	-0.2	-0.2	0	-0.3	-0.3	0.3	-0.2	-0.2	-0.2	-0.1
V	0.1	0.6	0.8	0.3	0.1	-0.2	0	0.5	-0.1	-0.1	0.1	-0.3	-0.1	-0.1	-0.2	-0.2	-0.2	-0.1	-0.1	-0.1
M	0.1	0.2	-0.5	-0.6	0	0.1	-0.1	-0.1	0	0	0	0.1	0	0	-0.1	0.1	0	0.9	0	0.1
W	-0.4	0.3	-0.4	-0.2	0.5	-0.1	0	-0.1	0	0	0	0	0	0	0	-0.8	0	-0.3	0	0.8
Y	-0.2	-0.4	0.3	0.3	-0.4	0.1	0	0.3	0	0.2	0	-0.1	0	0	0.6	-0.2	-0.7	0.3	0	-0.1
D	0.1	-0.1	0.3	0.1	0.3	-0.1	-0.1	0	0	0	0	-0.1	0	0	0	-0.3	0.3	-0.2	0	-0.3
E	0.7	-0.1	-0.2	0.2	0.3	-0.1	-0.1	0.2	0	0.2	0	-0.1	0	0	0	-0.2	-0.7	-0.2	0	0.4
K	0.4	-0.2	-0.4	0.3	-0.2	0.2	-0.1	-0.1	0	0	0.2	-0.1	0	0.1	0	0.5	0.3	-0.3	0	-0.5
R	0.1	0.2	0.1	-0.2	-0.2	0	0.3	-0.3	0	-0.1	-0.1	0.1	0.2	-0.1	-0.1	0.2	-0.5	0	0.2	0.1
H	-0.5	-0.9	-0.3	-0.3	-0.2	0	-0.1	-0.7	-0.1	-0.1	0.1	-0.1	-0.1	0.1	-0.1	1.9	1.6	0.3	-0.2	0
N	0.1	-0.4	0.3	-0.1	0.1	-0.1	-0.1	-0.1	0	0	0	-0.1	0.2	0	0	0.1	0.2	0.4	0	-0.3
Q	0.1	0.1	-0.4	-0.2	-0.2	0.1	0.2	-0.3	0	0	0	-0.1	0	0.2	-0.1	0.1	0.3	-0.1	0	0.1
S	0.1	-0.1	-0.2	0.1	0.2	-0.2	0.1	0.6	0	-0.1	0.2	0	-0.1	-0.1	-0.1	0.2	0.3	-0.2	0	-0.4
T	0.2	1.5	0.3	0.4	-0.1	-0.1	-0.2	-0.6	-0.1	-0.1	-0.1	-0.3	-0.1	-0.1	-0.1	-0.1	0.1	-0.2	-0.1	0.5
G	0.1	0	-0.2	-0.2	0.1	-0.1	0	0	0	0	0	-0.1	0	0	0	-0.1	0.4	-0.1	0	-0.2
P	-0.5	-0.3	0.3	-0.2	-0.3	0.1	-0.1	-0.3	0	0	0	1.3	0	0	0	-0.6	-0.2	0.2	0.2	0.3
C	0.1	0.5	-0.5	0.5	0	0.4	0	-0.1	0	0	0	0	0	0	0	-0.5	-1	0.1	0	0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0027	0.2	0.9	1	1.8	1.1	-0.2	-1.4	-0.4	-0.6	-0.3	-0.2	0.1	0.5	-0.4	-0.1	0.4	0.9	-0.9	-0.2	-1.2
0045	1.4	0.7	1.1	1.3	1.7	0.2	-1.2	0.1	-0.8	-0.4	-0.3	-0.3	-0.6	-0.7	-0.6	-0.7	-0.1	0.5	-0.7	0.4

Select residue pair below:

i_j	Score	Prob
0027_0045	1.141	0.97

Local Interactions:

i_j	Score	Prob
0026_0027	2.550	1.00
0027_0028	0.629	0.49

See all coupling residues
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