OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [P:0020] and [N:0022]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	-0.5	-0.1	-0.2	-0.6	-0.1	0	-0.8	-0.2	0.3	-0.1	0.7	0.5	-0.3	0.1	0.1	-0.1	0.4	0.5	0.2
F	-0.1	0.1	-0.2	-0.6	0	-0.1	-0.2	0	1.8	0.1	-0.4	-0.3	-0.3	-0.5	-0.2	0.5	0.7	-0.3	-0.4	0.2
I	-0.1	-0.2	-0.2	0.1	0	-0.3	-0.2	0	0.8	0.3	0.3	-0.2	-0.3	0.4	-0.1	-0.1	-0.3	0.3	-0.1	-0.2
L	-0.3	-0.1	-0.4	-0.1	0.8	-0.2	-0.2	-0.4	0.8	0.2	0	-0.4	-0.3	0.1	0.1	0	0.2	0.1	0.5	0
V	0.1	-0.6	-0.3	1.5	-0.6	-0.2	-0.2	-0.3	1	0.7	-0.1	-0.5	0.3	-0.4	-0.3	-0.1	-0.1	0.2	-0.6	0.2
M	-0.4	-0.2	-0.1	-0.3	0.3	-0.2	0.1	0.1	0.1	-0.3	1.1	-0.1	-0.2	0.1	0.1	0.5	-0.3	-0.2	-0.1	-0.1
W	-0.2	0.2	-0.1	-0.2	-0.1	-0.1	0	-0.1	0	-0.3	-0.2	-0.2	0.2	0.1	0.1	-0.2	-0.1	0.1	-0.2	0
Y	-0.2	0.1	-0.2	-0.7	-0.1	0.6	-0.2	0.4	1.1	0.3	-0.1	-0.7	-0.3	0.3	-0.1	0.4	-0.1	0.1	-0.1	-0.3
D	-0.1	0.1	-0.1	0.3	0.3	0.4	0.4	0.1	-0.8	0.1	0.3	0.5	0	-0.3	-0.4	-0.1	0.4	0	-0.2	-0.2
E	0.1	-0.4	0.6	-0.1	-0.2	0.5	-0.3	-0.1	-0.8	-0.3	1	0.9	0.4	0.2	0.2	-0.5	-0.6	0.4	-0.5	0.8
K	0.3	0.4	0	-0.3	-0.3	-0.2	0.1	0.6	0.1	-0.1	0.2	-0.2	-0.1	-0.3	-0.1	0	0	-0.1	0.6	-0.1
R	0.8	-0.3	0.1	0.2	-0.2	0.4	-0.1	0.2	0.5	0.1	-0.4	0	-0.1	0	-0.2	-0.7	0.1	0.1	-0.2	-0.5
H	0	0.6	-0.2	0.3	0.1	-0.7	0	0	-0.6	-0.2	-0.5	-0.1	0.5	-0.3	0.8	0.4	-0.1	0.3	0.2	-0.3
N	-0.2	-0.4	1	0	-0.3	-0.1	0	0.5	-0.4	0	0.2	-0.3	-0.2	0	0.2	0.2	0.1	0.3	-0.8	-0.2
Q	0.1	-0.1	-0.3	0.3	-0.2	-0.1	0.5	-0.5	-0.1	-0.7	-0.3	-0.1	0.5	0.1	0.7	-0.1	0.1	0.6	0	0.2
S	0.1	0	-0.1	-0.1	0	0.1	-0.3	0.1	-0.4	-0.2	0.1	0.2	0.1	0	-0.2	0.2	-0.2	0.2	0.9	0
T	-0.1	0.2	-0.4	-0.2	0.2	-0.5	0.1	0.2	-0.2	0.4	-0.5	0.1	-0.1	0.1	-0.5	-0.2	0.5	0	0.6	0.1
G	0.6	-0.4	-0.4	-0.1	0.6	-0.2	-0.4	-0.2	-0.4	0.4	0.4	0	-0.3	0.1	0.1	-0.1	0.1	0.3	-0.1	0
P	-0.7	1.4	-0.3	0.9	0.4	1	0.6	0.3	-1.3	-1	0	0.5	-0.4	0	-0.2	-0.5	-0.3	-0.4	0.5	0.2
C	-0.2	0.2	-0.1	-0.2	-0.2	-0.1	-0.1	-0.1	-0.2	0.1	-0.3	0.5	-0.1	-0.3	0.5	0.8	-0.3	-0.6	-0.3	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0020	0.6	-0.7	-0.6	0.1	-0.5	-1.1	-1.7	-0.8	0.9	1	0.8	0.4	-0.1	0.6	0.3	0.9	0.5	0.6	0.7	-1.2
0022	0.3	-0.6	-0.8	0.1	-0.4	-0.6	-1.1	-0.9	0.9	0.7	0.2	-0.2	-0.4	0.3	0.2	0.7	0.3	1.2	0	-0.9

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0018_0020	0.841	0.80
0020_0021	0.811	0.77
0019_0020	0.606	0.45
0020_0022	0.549	0.35

See all coupling residues
Download raw data

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