OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [N:0018] and [N:0022]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	-0.1	0.2	-0.2	-0.2	-0.4	-0.1	-0.1	0.6	0.6	-0.3	-0.6	-0.1	-0.1	-0.2	0.2	0.3	0.6	0.2	0.1
F	0.1	0.2	-0.1	-0.1	-0.1	-0.1	0	0.2	-0.2	0.3	0.1	0.1	-0.1	-0.1	0.1	-0.2	-0.1	-0.3	-0.2	0
I	0	0.1	0.2	0	-0.1	0.2	0	-0.1	-0.1	0	0.1	-0.1	-0.1	0.1	-0.2	-0.2	-0.1	-0.4	0.1	0.2
L	-0.2	-0.2	-0.1	0.8	0	0.1	0.4	-0.1	0.1	-0.2	-0.3	0	0.1	0.5	-0.3	-0.4	0.3	0	-0.3	-0.1
V	0.2	-0.2	-0.1	0	0	0.2	0.3	-0.1	0.1	0	-0.1	0.3	-0.2	0.2	-0.2	0.7	-0.2	-0.1	-0.1	-0.1
M	-0.1	-0.1	0	-0.1	-0.1	0	0	0	0.2	-0.1	-0.1	0.4	-0.1	-0.1	0.4	-0.2	-0.1	-0.2	-0.1	0.2
W	-0.1	-0.1	0	-0.1	-0.1	-0.1	0	0	0	-0.2	-0.1	-0.1	0.2	-0.1	-0.1	0.1	-0.1	0.1	0.1	0
Y	0	0.1	-0.1	-0.2	-0.1	0.2	-0.1	0.2	0.1	0	-0.2	-0.1	0.4	-0.2	0	-0.1	-0.2	-0.3	-0.2	0.2
D	-0.3	0	-0.2	0.2	0.1	0.4	-0.2	0.2	-0.4	0.1	0.7	0.7	0.1	0	-0.1	-0.2	-0.3	0.7	0.1	0
E	-0.2	0.7	0.5	0.7	0.2	0.6	0.5	0.1	-0.4	0	-0.1	-0.5	-0.4	-0.2	-0.4	-0.2	-0.3	0.5	-0.3	0.1
K	0	0.1	0.1	0.6	0.8	0.2	-0.3	-0.2	-0.2	0	0.2	-0.4	-0.5	0	-0.2	0.1	0.2	0.1	-0.6	-0.2
R	1.1	-0.1	0.1	0.3	0.2	-0.3	0	-0.1	0.1	0.2	-0.9	0.2	-0.2	-0.3	-0.3	0.4	0.1	0.5	-0.6	-0.2
H	-0.1	0	-0.3	-0.2	-0.2	0	-0.1	0	0.5	-0.1	0.1	0.5	-0.4	0.4	0.2	-0.1	-0.2	0.1	-0.4	0.2
N	-0.4	0.3	-0.1	0.3	-0.3	0	-0.4	-0.2	0.6	-0.3	0.4	0.6	0.2	0.1	0.3	-0.3	0	0.4	0.1	0.1
Q	0	-0.3	-0.3	0.4	0.2	0.3	0	0.1	-0.2	0	0.5	-0.2	0	-0.2	-0.2	-0.4	0.1	0.4	0.1	-0.1
S	0.1	-0.1	-0.3	0.1	0.1	-0.5	0.1	-0.4	0	0.5	0.3	0.1	0	-0.2	0.1	0.6	0.1	0.5	0.4	-0.2
T	0	-0.3	-0.2	-0.4	-0.2	-0.5	-0.5	-0.3	0.6	0.4	0.2	-0.1	0.4	-0.1	0.9	0.2	0.3	-0.7	0.8	-0.2
G	0.6	0.1	0.2	-0.8	-0.3	-0.4	-0.3	0.2	0.8	-0.3	-0.3	-0.3	0.2	0.9	0.6	0.1	0.5	-0.1	-0.5	-0.1
P	-0.1	-0.3	0.3	-0.1	0.2	0.1	-0.1	-0.2	-0.3	-0.5	0.1	-0.3	-0.1	0.1	-0.2	0.5	0.2	-0.5	0.8	-0.2
C	0.1	-0.2	-0.1	-0.4	-0.1	-0.1	0.2	-0.1	-0.4	-0.1	-0.1	-0.3	0.1	-0.1	0.2	0.2	0.2	0.5	0.4	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0018	0.5	-0.7	-0.7	0.2	-0.1	-0.8	-1.2	-0.7	1	0.6	0.7	0.8	-0.2	0.7	0.1	1.2	0.8	0.4	0.3	-0.7
0022	0.3	-0.6	-0.8	0.1	-0.4	-0.6	-1.1	-0.9	0.9	0.7	0.2	-0.2	-0.4	0.3	0.2	0.7	0.3	1.2	0	-0.9

Select residue pair below:

i_j	Score	Prob
0018_0022	0.673	0.56
0019_0022	0.554	0.36

Local Interactions:

i_j	Score	Prob
0021_0022	1.344	0.99
0020_0022	0.549	0.35

See all coupling residues
Download raw data

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