OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [N:0018] and [L:0019]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	0.2	0	0.3	0.5	-0.3	0.2	0.3	0.3	0	-0.3	0.5	-0.2	0	-0.1	-0.2	0.2	0	0	-0.3
F	0	0.1	-0.3	0.3	-0.1	-0.1	-0.1	-0.1	0	0.2	0	-0.1	0	0	0.2	0.1	-0.2	-0.1	-0.1	0
I	0.3	-0.2	-0.1	0	-0.3	0.1	0.3	0.1	-0.1	-0.1	0	-0.1	0	-0.1	-0.1	0.2	-0.3	-0.1	-0.2	0.2
L	-0.6	0.5	-0.1	0	-0.2	-0.1	0	-0.2	-0.1	0.7	0.1	0.4	0.2	0.1	-0.1	-0.5	0.1	0.2	-0.1	0.1
V	0.4	0.1	-0.2	-0.3	-0.3	-0.1	0.1	-0.1	-0.1	0.3	-0.1	0.3	-0.1	0.1	0.1	0.1	-0.2	-0.2	0.3	-0.1
M	-0.2	-0.1	0	0.6	-0.4	-0.1	-0.1	0.2	0	-0.1	0	-0.1	0.2	0	0	-0.1	-0.2	-0.1	0.1	0
W	0	-0.1	-0.1	-0.2	-0.2	-0.1	0.2	-0.1	0	-0.1	0	0.1	0	0	-0.1	0.1	0	-0.1	-0.1	0
Y	0.2	-0.2	0.2	-0.3	-0.2	0.1	-0.1	0.4	0	-0.1	0.2	-0.2	0	0.2	-0.1	-0.2	-0.2	-0.1	0.2	-0.1
D	0.7	0	0.5	0.6	0.6	0.6	0.3	-0.4	-0.5	-1.2	-0.6	-0.7	-0.1	-0.4	-0.4	0.3	0.5	0.4	0.3	0.8
E	0.2	0.5	-0.1	0.1	0.3	0.3	0.2	0.2	-0.5	0.1	-0.4	-0.7	0.4	0.7	-0.2	-0.2	0.1	-0.5	0.7	-0.3
K	0.3	0.2	0.5	-0.4	0	0.4	-0.2	-0.2	0.1	-0.4	-0.2	0.2	-0.2	0.1	0.3	0	-0.2	0.7	0.1	-0.2
R	-0.3	0.1	0.1	0.5	0.1	-0.3	-0.3	0	0.5	-0.1	0.2	-0.2	0	0	0.5	-0.6	0.2	0.2	0.1	0.1
H	0.2	0.2	0.2	0.3	-0.1	-0.5	-0.5	-0.2	-0.1	0.6	-0.2	0	-0.1	0.2	0	0.2	0.5	-0.2	-0.1	-0.2
N	0.5	-0.3	0.6	0.5	0.5	0.6	0.4	0.2	-0.9	-0.9	-0.1	0.3	0	-1	-0.2	0.5	0.5	0.1	0.3	-0.1
Q	-0.7	-0.1	0.2	-0.3	0.4	-0.1	-0.3	0.3	0.8	0.7	0	-0.3	0.1	0.1	0.1	-0.5	-0.1	0	-0.1	-0.1
S	0.5	0.3	0.4	0.6	0.2	0.1	-0.6	0.4	-0.1	0.2	-0.3	-0.3	-0.6	0	0	0.3	0.6	0.1	-0.3	0.2
T	-0.4	0	0.3	0.3	-0.2	-0.2	0.1	0.2	0.2	-0.4	-0.1	0.2	-0.1	-0.4	-0.2	0.7	0.3	-0.1	0	0.1
G	0.1	-0.2	-0.8	-0.8	-0.6	-0.5	0.7	-0.1	0.4	0.3	0.7	0	-0.1	0.3	0.5	0.3	0	0.3	-0.3	0.1
P	0.3	-0.5	0.2	0.2	0.3	0.1	-0.1	-0.3	0	-0.2	0.1	0.7	0.1	0.1	0	0.1	0.2	-0.2	-0.1	-0.1
C	0.1	0	0.2	0.1	0.1	0	-0.2	-0.2	0.1	-0.1	-0.1	-0.3	-0.1	-0.1	-0.1	0.2	-0.4	-0.2	0.6	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0018	0.5	-0.7	-0.7	0.2	-0.1	-0.8	-1.2	-0.7	1	0.6	0.7	0.8	-0.2	0.7	0.1	1.2	0.8	0.4	0.3	-0.7
0019	1.1	0.2	1	1.7	1.4	0.1	-0.4	-0.1	-0.6	-0.4	-0.9	0.3	-1.3	-0.7	-0.6	0.8	1.1	-0.4	0.5	-0.9

Select residue pair below:

i_j	Score	Prob
0018_0021	1.110	0.96
0018_0022	0.673	0.56
0014_0018	0.565	0.38

Local Interactions:

i_j	Score	Prob
0018_0020	0.841	0.80
0017_0018	0.707	0.62
0018_0019	0.630	0.49
0016_0018	0.535	0.33

See all coupling residues
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