OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [P:0011] and [R:0015]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	0	0.1	-0.1	0.7	0.7	0	-0.2	0.1	-0.2	-0.1	-0.1	0.5	-0.6	-0.2	0.2	0.1	-0.2	-0.1	-0.2
F	-0.3	0.1	0	-0.1	-0.2	0.2	0.2	0.1	-0.1	-0.2	0.2	-0.4	0.2	0.3	0.1	-0.2	-0.2	-0.1	0	0
I	0.1	0	-0.2	0	0.1	-0.1	0.1	-0.1	0.1	0	-0.1	-0.9	-0.3	-0.2	0.4	0.2	0.2	0.2	0.2	-0.2
L	0.2	-0.1	-0.4	0.5	-0.2	0	-0.1	0.2	-0.2	-0.2	-0.4	-0.2	0.3	0.1	0.3	0.5	-0.1	0.1	0.1	-0.4
V	0.5	0	-0.4	0.5	-0.1	-0.2	0.1	-0.1	-0.1	0.1	-0.5	0.2	0.4	-0.2	0.3	0	-0.4	0.1	-0.1	-0.1
M	0	0.1	-0.1	-0.1	0	-0.1	0	-0.1	0.1	-0.2	-0.5	0.6	-0.1	-0.1	0.1	-0.3	0	0.1	0	0.2
W	-0.1	0.1	-0.1	0.3	-0.1	0	0.2	-0.2	0	-0.1	0	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	-0.1
Y	0.1	-0.1	0.2	0.2	0	0.1	-0.1	-0.3	-0.1	0	-0.3	-0.1	-0.2	0.3	-0.2	-0.3	-0.1	0.1	0	0.2
D	0.1	0.3	0.9	0.4	0.8	0.5	0.6	-0.5	-1.2	-0.7	0.6	0.7	0.2	-0.4	-0.1	-0.3	0.4	-0.4	-0.9	0.1
E	-0.6	0.5	0.1	0.6	0.5	-0.1	0.1	0.6	0.1	-0.9	-0.2	0	0	-0.2	0	0.2	0	-0.3	-0.2	0.2
K	-0.4	0	0.4	-0.2	-0.1	-0.2	-0.1	0.6	0.1	-0.5	-0.3	-0.1	0.1	-0.4	0.1	0	0.4	-0.4	0	0.9
R	-0.5	-0.4	-0.3	0.8	-0.2	-0.1	-0.2	0.1	0	0.1	0.3	0.7	0.1	0	0.4	-0.7	-0.3	-0.1	0.4	0
H	0.2	-0.3	-0.6	-0.3	0	0	0.1	-0.1	0.1	1.4	-0.5	0.1	0.3	0	-0.3	-0.1	-0.1	-0.2	-0.1	-0.4
N	0.1	0.2	0.4	-0.5	0.8	0.2	-0.6	0	-0.2	1.2	-0.2	-0.6	-0.1	0.2	-0.1	-0.2	0	0.1	-0.3	0
Q	0.6	0	0.1	-0.5	-0.2	-0.3	-0.2	-0.1	0.1	0.6	0	0.6	-0.4	0.1	0.2	0.4	-0.8	-0.2	0.3	0
S	0.2	0.2	0.3	-0.3	0.1	0.1	-0.4	-0.4	-0.2	0	0.5	0.7	0	-0.3	-0.4	0.5	0.7	0	-0.4	-0.4
T	0.3	-0.3	-0.3	-0.4	-0.4	-0.3	-0.3	-0.3	0.6	0.6	0	0.2	0.1	0.1	-0.4	0	0.3	0.4	0.3	0.1
G	0.1	-0.3	-0.4	0.2	-0.1	-0.3	-0.1	0.5	0.1	-0.5	1.1	-0.1	0.1	0.3	0.4	-0.1	0.2	-0.5	0	-0.2
P	0.4	-0.6	-0.3	0.1	-0.8	-0.1	-0.1	-0.4	1.2	0.5	0.1	0	-0.8	0.8	0.1	0.3	-0.5	0.5	0.3	0.6
C	-0.3	-0.2	0.2	0.1	-0.1	-0.1	0.2	0.1	0.1	0.2	0.2	-0.4	-0.2	-0.1	-0.2	-0.1	0.2	0.1	0	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0011	0.3	-0.9	-0.6	-0.4	-0.5	-0.9	-1.4	-1	1.2	0.8	-0.1	0	-0.8	0.1	-0.1	0.6	0.2	0.3	1.7	-0.8
0015	0.7	0	0.2	0.8	0.6	-0.6	-0.9	0.3	0	0.6	0.3	1.3	0.5	0.1	0.6	0.8	0.7	-0.4	-1.3	-0.2

Select residue pair below:

i_j	Score	Prob
0011_0015	0.941	0.89
0011_0014	0.562	0.37
0011_0017	0.557	0.37

Local Interactions:

i_j	Score	Prob
0011_0013	1.423	1.00
0011_0012	0.969	0.91

See all coupling residues
Download raw data

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