May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

AntF_4 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [K:0031] and [F:0034]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 -0.1 0.4 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.2 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 -0.1 0
L 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
V -0.1 0 -0.1 -0.1 0 0 0 0 0 0.3 0 0 0 0 0 0 0 0 0.2 0
M -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4 -0.1 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
Y -0.1 0 0 0 0 0 0 0 0.2 0.3 0 0 0 0 0 0 0 0 -0.1 0
D -0.2 -0.1 0.2 -0.2 0.1 -0.1 0 -0.1 -0.1 -0.2 -0.1 0.4 0 -0.1 -0.1 0.2 -0.1 -0.2 1.4 0
E 0.1 -0.1 0.5 0.2 0.1 -0.1 0 -0.1 -0.1 0.5 0.3 -0.1 0 -0.1 -0.1 -0.2 -0.1 0.2 0 0
K 0.6 0.4 0.2 -0.1 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0.2 -0.1 -0.1 0.4 -0.1 -0.4 0
R 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
H -0.1 0.4 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 -0.1 -0.1 0
N -0.1 -0.1 -0.1 -0.1 0 0.3 0 0.1 0 -0.1 0 0 0 0.2 0.4 0.1 -0.1 -0.1 0 0
Q -0.1 0 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 -0.1 0.2 0
S -0.1 0 -0.1 -0.1 0 0.1 0 0 0.1 -0.1 0 0 0 0 0 0.4 0.2 -0.1 -0.2 0
T 0.1 -0.1 -0.1 0.4 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0.2 -0.2 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
P 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0.3 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0031 -0.1 -0.5 -0.4 -0.5 0.1 -0.2 -0.5 -0.1 1.1 1.1 0.7 -0.2 0.3 0.6 0.2 0.1 0.2 -0.5 -0.2 -0.5
0034 0.2 0.1 0.2 0.2 -0.2 -0.1 -0.4 -0.3 -0.2 0.4 -0.1 -0.1 -0.4 -0.1 -0.1 0.1 0 0.2 0.6 -0.4
Select residue pair below:
i_j Score Prob
0034_0048 1.077 0.57
0034_0055 0.930 0.41
0034_0054 0.820 0.31
0031_0034 0.742 0.24
Local Interactions:
i_j Score Prob
0034_0036 0.957 0.44
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G N V S ...

Page generated in 0.0087 seconds.