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Coupling matrix for [R:0017] and [A:0023]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 0.3 -0.1 -0.1 0 0.3 0.1 0.4 -0.1 -0.1 -0.1 -0.1
R 0.8 0 0 0 0 0 0 0 -0.1 -0.1 0 0.2 -0.1 -0.1 0.2 -0.1 0 0 0 0
H -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0017 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0.1 -0.1 -0.1 0.7 0.6 -0.1 -0.1 0.4 0.1 -0.1 -0.1 -0.1 -0.1
0023 1.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 0.2 -0.2 0.1 -0.1 0.3 0.3 0.3 -0.2 -0.2 -0.2 -0.2
Select residue pair below:
i_j Score Prob
0017_0025 1.681 0.95
0014_0017 1.536 0.91
0017_0023 1.065 0.56
0009_0017 0.980 0.47
0001_0017 0.789 0.28
0010_0017 0.770 0.26
0017_0027 0.756 0.25
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G N V S ...
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