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Coupling matrix for [V:0004] and [E:0028]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
F 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
I -0.1 0 0 0 0 0 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0
L -0.2 0 0 0 0 0 0 0 0.4 1 0 0 0 0 0 0.3 0 0 0 0
V -0.1 0 0 0 0 0 0 0 -0.1 0.4 0 0 0 0 0 0 0 0 0 0
M 0.3 0 0 0 0 0 0 0 0.3 -0.3 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
S 0.3 0 0 0 0 0 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0
T -0.1 0 0 0 0 0 0 0 0 0.4 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
P 0.7 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0004 -0.2 -0.3 0 1.4 0.3 0.4 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 0.4 0.2 -0.3 0.6 -0.3
0028 1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.6 2.1 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 -0.2 -0.2 -0.2
Select residue pair below:
i_j Score Prob
0004_0012 1.403 0.85
0004_0028 1.124 0.62
Local Interactions:
i_j Score Prob
0004_0005 1.414 0.85
0002_0004 0.779 0.27
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G N V S ...
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