May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [D:0333] and [L:0334]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.4 -0.1 -0.5 -0.2 -0.6 0.1 -0.4 -0.1 -0.3 0.9 0.5 0 -0.4 0.3 0.1 -0.4 1 0.3 0.1
F -0.3 0.1 -0.1 0.3 0.1 0.7 -0.2 -0.3 -0.1 -0.2 0.3 -0.3 -0.3 -0.1 0.1 0.1 0.1 -0.3 -0.2 0.5
I -0.2 0.1 -0.3 0.2 -0.3 -0.3 -0.3 -0.1 -0.1 0.3 0.1 0 -0.1 0.6 0.5 0.2 -0.1 0.3 -0.2 -0.7
L 0 -0.5 -0.6 0 -0.3 -0.1 -0.3 -0.3 -0.1 -0.3 0.2 0.5 0.2 0 0.1 0.4 0.4 0 0.1 -0.3
V -0.1 0.8 -0.4 -0.7 0 0.2 0 -0.3 -0.1 -0.2 0.4 0.5 0.1 0.3 -0.2 0 -0.2 -0.2 0.2 -0.2
M -0.1 -0.1 -0.3 -0.1 -0.3 0.2 -0.3 -0.2 0 -0.1 0.8 -0.3 0.7 0 -0.2 0.2 -0.2 -0.2 -0.1 0.5
W -0.3 1.1 -0.4 1.9 -0.5 1.6 -0.4 -0.1 -0.1 -0.2 -0.6 -0.4 -0.2 -0.2 0.1 -0.6 -0.2 -0.2 -0.2 0.4
Y -0.1 0.4 -0.2 -0.1 -0.2 -0.2 0.2 -0.1 0 -0.1 0.6 -0.1 0.3 -0.1 -0.2 -0.3 -0.1 -0.1 -0.1 0.5
D 0.6 -0.5 0.6 1.4 0 0 0.1 -0.4 -0.1 -0.2 -0.5 -0.3 -0.4 -0.1 -0.3 0.7 0.1 -0.2 0 -0.2
E -0.2 -0.1 0 -0.1 0.3 -0.4 0.5 0.2 0.4 0.3 0.3 -0.7 -0.3 -0.2 0.1 0.1 0.1 -0.2 -0.2 -0.2
K 0.1 0 0.3 -0.2 0.1 0 0 0.3 0.2 0.3 0 -0.2 0.3 0.4 -0.5 0 0.7 0.1 -0.5 -0.5
R 0.1 0 0.6 0 0.3 -0.2 -0.3 0.6 -0.3 -0.1 -0.1 0.1 0.1 -0.1 0.2 -0.4 0.1 0.2 -0.1 0
H -0.3 -0.1 -0.4 0 0 -0.3 0.5 0.9 -0.1 -0.2 0 0.1 -0.3 0.2 0.6 0.2 -0.2 -0.2 -0.2 -0.2
N -0.2 -0.5 0.4 0.4 0.5 0.3 -0.3 0 -0.1 -0.2 -0.1 0 0.2 0.4 -0.4 -0.1 0.1 0.1 0.1 -0.3
Q 0.1 0.8 0.9 -0.7 -0.2 0.1 0.5 0.5 -0.1 0.1 -0.6 -0.3 -0.2 -0.4 0.2 -0.1 -0.3 -0.3 -0.3 0.3
S 0.3 -0.1 0 0.5 0.7 0.5 -0.1 -0.5 0.3 -0.5 0.1 0.2 0.4 -0.7 -0.2 -0.3 -0.6 0 0.8 -0.1
T -0.1 -0.4 0 0 0 0.6 -0.1 0.4 -0.1 -0.2 -0.4 0.3 -0.1 0.3 0 -0.1 0.6 -0.3 0.1 -0.3
G -0.3 -0.2 -0.2 -0.2 0.2 -0.6 0.8 -0.5 -0.1 1.1 -0.2 0.2 -0.6 -0.1 0.3 0.3 0.5 0.2 -0.2 -0.5
P 0.1 -0.2 -0.1 -0.3 -0.5 -0.4 -0.1 0.5 -0.1 -0.2 -0.4 0.4 0.1 -0.3 -0.1 0.6 0.1 -0.1 -0.1 1.1
C 0.5 -0.1 -0.1 -0.4 0.1 -1 0.2 0.1 -0.3 0.4 0.2 0.5 -0.2 0.3 0.1 -0.3 -0.5 0.2 0.2 0.8
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0333 0.2 -0.2 -0.6 0.2 -0.2 -0.8 -0.4 -1 -0.6 -0.6 1 1.4 -0.4 -0.2 -0.2 0.7 -0.1 0.4 -0.3 1.6
0334 -0.2 0.4 0 1.1 0.3 0 0.1 -0.2 -1.5 -1 0.9 1 -0.3 -0.5 -0.1 0.7 -0.6 -0.5 -0.6 1
Select residue pair below:
i_j Score Prob
Local Interactions:
i_j Score Prob
0334_0335 0.966 0.88
0333_0334 0.821 0.74
0332_0334 0.819 0.73
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0171 seconds.