May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [F:0323] and [R:0324]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.1 -0.2 -0.2 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 -0.4 0.3 -0.1 -0.1 0.7 0.4 -0.1 0.3 -0.1 -0.2
F -0.2 -0.6 -0.5 -0.7 0.2 0 -0.3 -0.4 -0.1 -0.5 0.8 1.3 0.7 0.6 0.7 0.6 0.5 -0.9 0.2 -0.1
I -0.2 -0.1 -0.2 0.1 0.1 0.3 -0.2 -0.1 -0.1 -0.1 0.8 0.9 0 -0.2 0.1 -0.3 0.2 -0.3 -0.2 0.2
L -0.4 0.5 0.1 1.3 0 -0.3 0.3 -0.3 -0.2 0.3 -0.4 0.1 -0.3 0.3 -0.9 -0.4 0.1 1.3 -0.3 0.1
V -0.2 -0.1 -0.1 -0.1 -0.3 -0.1 0.6 -0.1 -0.1 -0.1 -0.4 0.8 -0.1 0.3 0.6 -0.2 -0.1 -0.2 0.1 0.5
M -0.1 0.8 -0.2 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.7 0.3 -0.1 -0.1 -0.3 0.3 -0.1 -0.1 -0.1 -0.1
W 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 -0.7 0 0 -0.1 0 0 0.4 1 -0.1
Y 0.7 -0.2 1.2 -0.3 -0.2 -0.1 -0.2 0.2 -0.1 -0.1 0.3 1.5 -0.2 -0.3 -0.2 -0.3 -0.3 -0.4 -0.2 -0.3
D 0 0 0 -0.1 0.5 0 0 0 0 0 -0.1 -0.4 0 0 -0.1 0 0 0 0 -0.1
E 0 0 -0.1 -0.1 0 0 0 0 0 0 0.3 -0.5 0 0 -0.1 0 0 -0.1 0 0.5
K 0 0 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.4 0 0 -0.1 0.5 0 0 0 0
R 0 0 -0.1 0.6 0 0 0 0 0 0 -0.2 0.2 -0.1 0 -0.1 -0.1 0 -0.1 0 -0.1
H -0.1 0 0.7 -0.1 0.5 0 0 0 0 0 0.1 -0.4 0 -0.1 -0.2 -0.1 0 -0.1 0 -0.1
N 0.5 0 0.3 -0.1 -0.1 0 -0.1 0 0 0 -0.3 0.2 0 -0.1 -0.3 -0.1 -0.1 0.2 -0.1 -0.1
Q 0 0 -0.1 1.1 0 0 0 0 0 0 -0.1 -0.6 -0.1 0 -0.1 0 0 0 0 0
S -0.1 0 -0.1 -0.1 0.1 -0.1 0.4 0 0 0 -0.3 0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.4
T -0.1 0 0.3 -0.2 -0.1 0 -0.1 1.2 0 0 -0.4 -0.7 0.5 -0.1 -0.3 -0.1 -0.1 0.3 -0.1 -0.1
G 0.4 -0.1 -0.4 0.1 -0.1 -0.1 -0.1 -0.1 0.8 0.4 0.8 -0.8 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.2
P 0 0 -0.1 0.1 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 0
C -0.1 -0.1 -0.2 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.3 -0.1 -0.1 1.5 -0.1 -0.1 -0.1 -0.1 0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0323 0.1 1.1 0.8 1.7 0.6 0.3 -0.4 0.4 -0.8 -0.6 -0.7 -0.4 -0.1 -0.4 -0.5 -0.4 -0.1 0.3 -0.8 0.3
0324 -0.3 -0.5 0.4 0.8 -0.3 -0.6 -0.3 -0.4 -0.7 -0.9 1.6 2.6 -0.2 -0.5 0.9 -0.2 -0.4 0.1 -0.4 0.2
Select residue pair below:
i_j Score Prob
0085_0324 0.808 0.72
Local Interactions:
i_j Score Prob
0323_0324 1.278 0.98
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0162 seconds.