May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0317] and [G:0320]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.3 0.4 -0.7 0.3 -0.3 -0.1 -0.1 0.1 0.1 -0.1 -0.1 -0.6 1.5 -0.1 0.3 -0.3 0.2 0.4 -0.1 -0.7
F -0.5 0.5 0.1 0.7 0.1 -0.5 -0.1 -0.2 0.5 -0.2 0.5 -0.2 -0.9 -0.3 0.3 0.1 -0.6 0.3 -0.1 1.3
I -0.4 -0.2 -0.2 0.1 0.2 -0.2 0 0.1 -0.1 -0.1 0.2 0.8 -0.3 -0.2 0.1 -0.5 0.2 0.1 0 1.2
L 0.1 -0.3 -0.3 0.1 -0.2 0.7 0 0.3 0.6 0.4 -0.2 0 -0.2 -0.5 0.2 0.1 -0.5 -0.1 0 1
V 1 -0.3 -0.4 0.2 0.2 0.2 0 -0.2 0.1 0.1 0.2 -0.5 -0.6 -1.1 -0.4 -0.2 -0.2 1.1 0 0.7
M -0.1 -0.1 -0.1 -0.1 -0.1 0.3 0 0.7 0.2 0 -0.1 -0.1 -0.3 0.7 -0.2 0.4 -0.2 -0.6 0 -0.1
W 0 0 0 0 0 0.4 0 0 0.3 0 0 0 0 -0.2 0 -0.1 -0.1 -0.2 0 -0.1
Y 0.2 0 0.9 -0.3 -0.1 -0.3 0 -0.2 0.2 -0.1 -0.2 -0.4 -0.2 1 0.2 1.1 0.4 -0.6 0 -1
D 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.2 0 -0.1 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.2 0 -0.1 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.2 0 -0.1 0 0
R -0.1 -0.1 0 0 0 0 0 0 0.6 0 0 0 0 0.2 0 -0.4 -0.1 0.1 0 -0.1
H -0.1 0.4 -0.1 -0.1 0 0 0 0 -0.2 0 0 0 -0.1 -0.3 0.7 0.2 -0.1 -0.1 0 -0.2
N 0.2 -0.1 -0.1 -0.1 0 -0.1 0 -0.1 -0.5 0 0.4 -0.2 0.1 0.2 -0.2 1.4 -0.2 -1 0 -0.2
Q -0.1 0.4 0 -0.1 0 0 0 0 -0.1 0 0 -0.1 -0.1 0 -0.1 0.1 -0.1 -0.3 0 -0.1
S 0.2 -0.1 0.3 -0.1 -0.1 -0.3 0 -0.1 0.3 -0.1 -0.1 -0.3 0.4 0.1 -0.2 0.1 0.1 0 0 -0.1
T -0.3 -0.1 0.3 -0.1 0 -0.1 0 -0.1 -0.4 0 -0.1 0.3 -0.1 -0.3 0.4 -0.4 0 1.3 0 -0.4
G 0.2 -0.2 -0.3 -0.1 -0.1 -0.3 0 -0.1 -0.3 -0.1 -0.2 -0.3 1.1 1 -0.2 -0.4 1.1 -0.2 0 -0.4
P -0.1 -0.1 -0.1 0 0 0.8 0 0 -0.2 0 -0.1 -0.1 0.4 -0.5 -0.1 0.2 -0.1 -0.3 0 -0.1
C -0.1 -0.2 0.9 -0.3 0.2 -0.4 -0.1 -0.2 -0.8 -0.1 -0.3 1.9 -0.4 0.8 -0.5 0.2 0.1 0.2 -0.1 -0.5

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0317 -0.4 1.4 1.2 1.8 0.2 0.3 -0.5 1 -0.9 -0.9 -0.9 -0.1 -0.2 -0.8 -0.2 0 -0.2 0 -0.7 0.6
0320 0.1 -0.1 0 0.1 -0.5 -0.1 -0.8 -0.2 0.3 -0.6 -0.4 -0.1 0.2 1 0.2 1.4 0.2 0.3 -0.8 0.3
Select residue pair below:
i_j Score Prob
0067_0317 1.274 0.98
0234_0317 1.023 0.91
0317_0320 0.845 0.77
0259_0317 0.760 0.65
Local Interactions:
i_j Score Prob
0315_0317 1.172 0.97
0316_0317 0.853 0.78
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0215 seconds.