May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [H:0308] and [C:0309]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.2 0.8 -0.1 0.3 -0.1 0 -0.2 0 -0.1 -0.1 -0.1 -0.2 -0.2 0 0.1 0.4 -0.1 0.6 -0.6
F 0.3 0.5 0 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0 -0.4 -0.1 -0.1 0 0.1
I 0.2 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.4 -0.1 0.2 -0.1 -0.4
L -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 -0.1 -0.2
V 0.8 -0.1 -0.1 0 -0.1 0 0 0.4 0 -0.1 0 0 -0.1 -0.2 0 0.2 -0.3 -0.2 -0.1 0
M -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.5 0 -0.2 0 0 0 -0.1
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
Y -0.5 1.3 -0.1 0 -0.2 0 0 -0.1 0 -0.1 0 0 -0.1 -0.1 0 -0.3 -0.3 0.2 -0.1 0.6
D -0.1 -0.1 -0.1 0 -0.1 0 0 -0.1 0 0 0 0 -0.1 0 0 0.3 0 -0.1 -0.1 0.5
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
K -0.2 0.9 -0.1 0 -0.2 0 0 -0.1 0 0 -0.1 0 -0.1 -0.1 0 0.2 -0.1 0 -0.2 0.2
R 0.4 -0.3 -0.2 -0.1 -0.3 -0.1 0 -0.2 0 1.5 -0.1 -0.1 -0.3 -0.4 -0.1 -0.8 -0.4 0.4 0.7 0.7
H -0.2 -0.5 -0.5 -0.1 0.3 -0.1 -0.1 -0.3 -0.1 -0.1 -0.2 -0.1 0.5 -0.5 -0.1 0.3 -0.5 0.4 -0.5 2.2
N 0 -0.4 0.3 0.4 0.5 -0.2 -0.2 0.1 -0.2 -0.6 -0.5 -0.3 0.3 1.4 -0.3 1.1 -0.4 0.5 -0.8 -0.6
Q -0.1 -0.2 -0.1 0 -0.2 0 0 -0.1 0 -0.2 0 0 0.3 0.2 0.4 0.1 0.1 -0.1 -0.2 0.4
S 0.7 -0.2 0.2 -0.2 -0.1 0.2 -0.1 0.8 -0.1 0.1 -0.3 -0.1 -0.3 -0.3 -0.1 0.1 1.4 0.1 -0.6 -0.7
T 0.2 0.3 -0.2 -0.1 0.2 0 0 0.5 0 -0.1 -0.2 0.4 -0.2 -0.2 0 0.2 0.1 -0.3 0.1 -0.1
G -0.6 -0.3 -0.1 -0.1 0.5 0 0 -0.3 0 -0.1 1.4 0 0.6 -0.2 0 -0.7 -0.3 -0.3 0.6 0.1
P 0.2 -0.1 -0.1 0 -0.2 0 0 -0.1 0 -0.1 0 0 0 0.2 0 0 0.2 -0.1 0.9 -0.6
C -0.2 -0.1 0.7 0 -0.1 0 0 -0.1 0 0 0 0 -0.1 -0.1 0 0.2 0.4 -0.1 -0.1 -0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0308 0.3 0.1 -0.2 -0.4 -0.2 -0.4 -0.5 0.2 -0.2 -0.5 -0.2 0.6 0 -0.2 0.2 0.7 0.8 0.2 0.2 -0.1
0309 1.2 0.6 0.1 -0.6 -0.1 -0.9 -1.1 0.1 -1.1 0.1 -0.4 -0.9 0.2 -0.1 -0.8 1.5 0.2 0.4 0.5 2
Select residue pair below:
i_j Score Prob
0266_0309 0.954 0.87
0309_0313 0.852 0.77
0081_0309 0.799 0.71
Local Interactions:
i_j Score Prob
0308_0309 2.694 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0183 seconds.