May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0307] and [L:0311]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.8 0.1 0.2 0.4 0.1 0.3 0.6 -0.6 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.5 0.3 0 -0.2 0
F 0.7 0.5 0.2 1 0.5 0.2 -0.4 -0.6 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.3 -0.4 0.1 -0.4
I 0.8 -0.8 0.7 -0.2 0.4 0.3 -0.3 -0.6 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 1 -0.1 0 -0.2 0.8
L 0.7 0.2 0.6 0.9 0.7 -0.2 -0.4 -0.6 -0.2 -0.2 -0.2 -0.2 -0.3 0.2 -0.2 -0.1 0.6 0.4 -0.5 0.3
V 0.9 -0.2 0.3 0.1 0 -0.6 -0.3 -0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1 0.2 0 0.6 0.1
M -0.2 -0.3 0.3 0.6 0.6 -0.2 -0.1 0.1 0 0 0 0 -0.1 -0.1 -0.1 -0.4 -0.1 0.3 -0.1 0.4
W -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 -0.1 0.2 -0.3 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 -0.1 -0.2 -0.3 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0.5 0 0
S -0.9 0.5 0 0.2 0.1 0.6 0.4 2.6 -0.1 -0.1 -0.1 -0.1 0.2 -0.2 0.2 -0.3 -0.6 -0.5 -0.3 -0.4
T -1.1 0.4 0.5 0.8 0.4 0.6 0.5 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 -0.2 -0.3
G 0.1 0.7 0 -0.5 0.3 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 -0.1
P -0.1 -0.1 -0.2 0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0.1 0 0.4 -0.1 0.2 -0.1 -0.2 0 0 0 0 -0.1 0 0 0 0.6 -0.1 -0.1 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0307 1.8 1.4 1.5 2.4 1.5 0.8 -1.3 -1.1 -1.3 -1.3 -1.3 -1.3 -1.3 -1.3 -1 1.9 1.5 -0.3 -1.1 0.6
0311 1.7 1.2 2.6 3 2.5 1.1 -0.5 0 -1.6 -1.6 -1.6 -1.6 -1.2 -1.4 -1.4 0.5 0.8 -0.5 -0.9 0.4
Select residue pair below:
i_j Score Prob
0307_0311 1.054 0.93
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0164 seconds.