May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [F:0306] and [H:0308]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 0 0 0 -0.1 0 0 0.3 -0.4 0 0.4 0.2 -0.1 0.6 -0.1 -0.7 -0.3 -0.2 -0.1 0
F -0.8 -0.1 0.8 0.6 -0.2 -0.1 -0.1 -1.1 -0.1 -0.1 0.7 1.2 -0.2 -0.2 1.2 0.2 -0.4 -0.8 -0.2 -0.2
I -0.2 -0.1 -0.1 -0.1 0.5 0 0 -0.2 -0.2 0 0.2 -0.4 -0.8 -0.3 0 0.2 0.6 0.7 0.2 0.3
L -0.3 -0.3 -0.3 -0.2 0 -0.1 0 -0.1 -0.1 0 -0.2 -0.2 1.3 -0.3 0.6 -0.1 -0.1 1.1 0.1 -0.2
V 0.3 -0.1 -0.1 -0.1 -0.1 0 0 -0.2 -0.1 0 0.2 0.1 -0.2 0.1 0.1 0.3 -0.1 0 1 -0.2
M -0.2 0.4 -0.2 -0.1 -0.1 0.3 0 -0.2 -0.2 0 -0.3 -0.6 0.8 -0.6 -0.6 0.7 0.9 0.4 -0.2 -0.3
W 0.3 0 0 0 0 0 0 0 0 0 0 -0.1 0.1 -0.1 0 -0.2 -0.1 0 0 0
Y -0.4 0.2 -0.5 -0.2 -0.2 -0.1 -0.1 1 0.9 -0.1 -0.4 0.2 0.3 0.1 -0.2 0 -0.3 -0.6 -0.3 0.9
D 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.2 0 0 -0.1 0 0 0 0
K 1 -0.1 0.1 0 0.6 0 0 -0.1 0 0 -0.1 -0.1 -0.5 -1.2 -0.1 0.3 0.2 -0.2 -0.1 -0.1
R -0.1 0 0 0 0 0 0 0.3 0 0 0 -0.1 -0.2 -0.7 0 0.6 -0.1 0 0 0
H 0.2 0 0 0 0 0 0 -0.1 0 0 0 -0.1 -0.5 0.7 -0.1 -0.5 -0.1 0.3 0 0
N -0.1 0 0 0 0 0 0 0.2 -0.1 0 0 -0.3 0.1 0.2 -0.1 -0.1 0.4 -0.1 -0.1 0
Q 0.3 0 0 0 0 0 0 -0.1 0 0 0 -0.1 -0.1 0 0 0.1 -0.1 -0.1 -0.1 0
S -0.3 0.3 0 0 -0.1 0 0 0.7 0.5 0 -0.1 -0.1 -0.5 0.8 -0.2 0.7 0.1 -0.3 -0.2 -0.1
T 0.3 0 0 0 -0.2 0 0 -0.1 -0.1 0 -0.1 0.4 0.4 0.6 -0.1 -0.4 0.2 -0.2 -0.1 0
G 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0.3 -0.1 0 0 0
P -0.1 0 0.4 0 0 0 0 0 0 0 0 -0.1 -0.3 0.6 -0.1 -0.4 -0.1 -0.1 0 0
C -0.3 0 -0.1 0 -0.1 0 0 -0.2 0 0 -0.1 0.5 0.7 -0.1 -0.1 -0.3 -0.3 0.3 0.5 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0306 -0.2 0.2 0.5 0.7 1.3 -0.1 -0.4 0.4 -0.7 -0.4 -0.5 -0.7 -0.6 -0.1 -0.5 1.7 0.3 -0.3 -0.7 0.8
0308 0.3 0.1 -0.2 -0.4 -0.2 -0.4 -0.5 0.2 -0.2 -0.5 -0.2 0.6 0 -0.2 0.2 0.7 0.8 0.2 0.2 -0.1
Select residue pair below:
i_j Score Prob
0063_0306 1.119 0.95
0080_0306 1.004 0.90
0256_0306 0.992 0.90
0070_0306 0.870 0.79
0306_0312 0.847 0.77
0095_0306 0.774 0.67
Local Interactions:
i_j Score Prob
0306_0308 0.813 0.73
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0385 seconds.