May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0278] and [L:0315]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.6 0.6 -0.1 0.6 0.3 -0.3 0 0 0 0 0 -0.1 0 0 0 -0.1 -0.3 0 0.6 -0.1
F 0 0 0.3 -0.9 0.2 0.2 0 0 0 0 0 -0.1 0 0 0 -0.1 0.1 0 -0.2 0.6
I -0.3 0.6 -0.4 0.2 -0.1 0.8 0 0 0 0 0 -0.1 0.2 0 0 -0.1 0.2 0 0.2 -0.3
L -0.1 0.2 -0.4 0.6 -0.1 0.1 0 0 0 0 0 -0.1 0 0 0 -0.1 0.2 0 -0.1 0.1
V -0.3 0.8 0.4 0.8 0 -0.3 0 0 0 0 0 -0.1 0 0 0 -0.1 -0.4 0 -0.1 -0.3
M -0.2 0.1 -0.2 0.3 0.6 -0.3 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1
W 0 -0.3 -0.1 -1.1 0.2 0.7 0 0 0 0 0 0 0 0 0 0 0.6 0 -0.1 -0.1
Y 0.7 -0.3 0.2 -0.7 0.5 -0.5 0 0 0 0 0 -0.1 0 0 0 -0.1 0.2 0 -0.2 0.8
D 0.7 0.1 -0.1 0.2 0.1 -0.3 0 0 0 0 0 0 0 0 0 0 -0.2 0 -0.1 -0.2
E -0.2 0.1 0.4 0.2 -0.4 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1
K -0.3 -0.2 0.1 0.4 0.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1
R 0 -0.3 0.7 -0.4 0 -0.2 0 0 0 0 0 0 0 0 0 0 0.3 0 -0.1 -0.1
H 1.3 -0.3 0.2 -0.5 -0.4 0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1
N 0.1 0.2 0 -0.9 0.4 0.3 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0.2
Q -0.2 -0.1 0.2 -0.1 -0.2 0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1
S 0.8 -0.1 -0.3 0.6 0.1 -0.3 0 0 0 0 0 -0.1 0 0 0 -0.1 0 0 -0.2 0.3
T -0.7 -0.6 0.4 1 0.7 -0.1 0 0 0 0 0 -0.1 0 0 0 0.4 -0.1 0 -0.2 -0.1
G -0.4 0.4 -0.1 0.5 -0.7 -0.4 0 0 0 0 0 0 0 0 0 0 0.4 0 0.7 -0.1
P -0.1 -0.1 -0.3 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4
C -0.1 -0.2 0.1 -0.2 0.1 -0.1 0 0 0 0 0 0.5 0 0 0 0 -0.1 0 -0.1 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0278 0.5 -0.1 0.9 0.5 0.5 -0.2 -0.3 0.5 0.1 -0.6 -0.5 -0.3 0 0 -0.7 0.6 0.8 0.1 -1.1 -0.6
0315 -0.5 1.1 1.6 1.9 1.5 0.3 -0.5 -0.5 -0.5 -0.5 -0.5 -0.4 -0.4 -0.5 -0.5 -0.4 0 -0.5 -0.2 0.4
Select residue pair below:
i_j Score Prob
0258_0278 0.886 0.81
0126_0278 0.827 0.74
0278_0315 0.801 0.71
0177_0278 0.800 0.71
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0168 seconds.