May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [H:0270] and [L:0274]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.1 -0.4 -0.2 0.1 0 -0.2 -0.1 -0.2 -0.1 0.6 0 0.4 0.2 1.1 -0.3 -0.2 -0.3 0 0
F -0.2 -0.6 -0.4 -0.5 -0.2 0.2 -0.9 -0.9 -0.3 0.4 0.9 0.9 0.1 -0.1 0.8 0.1 1.1 -1.2 -0.1 0
I 0.4 0.1 0.5 0.4 0.6 -0.1 -0.3 -0.1 -0.2 -0.2 0.7 -0.2 0 -0.3 -0.5 -0.5 0.5 0.1 0 -0.1
L -0.4 0.8 0.6 0 -0.1 0 -0.3 -0.2 0.4 -0.5 -0.1 1.4 -0.3 0.3 -0.6 -0.1 0.1 -0.5 -0.1 -0.1
V 0.4 0.7 0.3 -0.5 0.4 0.1 -0.2 -0.2 -0.3 -0.2 -0.2 -0.4 -0.2 0.1 -0.3 0.4 0.2 0 0 0
M -0.2 0 0.2 -0.4 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.2 0.4 0.7 -0.2 -0.2 0.1 0.3 0 0
W 0.7 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 -0.2 -0.1 0.3 -0.2 -0.1 0 0
Y 0.4 0.3 0.5 0.4 0.6 0.2 -0.8 -1.2 0.4 -0.2 -0.3 0.7 -0.7 -0.2 0.8 0.5 -0.9 0.6 -0.3 0.2
D 0.5 -0.2 0.1 -0.1 0.2 -0.2 0.2 0.8 -0.1 -0.1 -0.1 0.6 -0.2 -0.6 -0.2 0.1 -0.6 -0.1 0 0
E -0.3 0.1 -0.3 -0.6 -0.3 -0.2 1.6 0.1 -0.2 -0.2 -0.2 -0.3 0.6 0.7 -0.2 0.3 -0.3 -0.3 0 0
K 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 0
R 0.2 -0.2 0.2 0.9 0.2 0.1 -0.2 -0.2 -0.2 -0.2 -0.3 -0.4 -0.2 0.6 -0.2 -0.1 0.1 0.1 0 0
H -0.3 -0.5 0.3 0.1 0.2 -0.4 0 -0.6 -0.2 0.5 -0.2 -0.3 0.5 -0.2 0.4 0.9 0.6 -0.4 0 -0.1
N -0.6 -0.6 -0.6 -0.1 -0.3 0.3 0.1 1.5 -0.2 0.2 -0.3 0.3 -0.3 0 -0.5 0.3 1.4 -0.5 0 -0.1
Q 0.2 -0.1 0 -0.1 -0.3 0.7 0.9 0.7 -0.4 -0.2 -0.1 -0.6 -0.5 -0.2 -0.2 0 -0.3 1.1 -0.1 -0.1
S -0.4 -0.2 -0.2 0.9 0.1 0 0.2 0.7 -0.3 0.2 0 0 0.5 -0.4 -0.4 -0.3 -0.1 0.4 -0.1 -0.1
T -0.4 0.7 -0.4 0.9 -0.3 0.5 0.2 0.1 -0.2 0.5 -0.2 -0.4 -0.2 -0.4 0.1 -0.3 -0.1 0.1 0 0
G 0.4 0 0.3 -0.3 -0.3 -0.3 -0.1 0.3 0.3 -0.1 -0.1 -0.4 0.3 -0.2 -0.2 -0.2 -0.2 1.1 0 0
P -0.2 -0.3 -0.2 0 -0.1 -0.1 -0.1 -0.2 0.9 0 -0.1 -0.2 -0.1 0.8 -0.1 -0.1 -0.4 -0.1 0 0
C -0.1 0.1 -0.1 0.1 0.1 -0.1 -0.1 0.2 0.4 -0.1 0.1 -0.1 -0.1 0 -0.1 -0.1 -0.2 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0270 0.4 0.4 0.7 0.8 0 -0.4 -0.7 1.1 0 -0.3 -1.2 0 0 0.1 0.5 0.6 -0.1 0.1 -0.4 -0.7
0274 0.2 0.2 0.3 1 0.6 0.4 -0.5 0.4 -0.6 -0.6 -0.1 0 -0.1 0.7 -0.1 0.8 0.4 0.2 -1.5 -1.1
Select residue pair below:
i_j Score Prob
0103_0270 0.975 0.89
0270_0313 0.822 0.74
0144_0270 0.765 0.66
0270_0274 0.748 0.63
0125_0270 0.745 0.63
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0125 seconds.