May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [Q:0267] and [H:0308]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0 0 0 0 -0.1 0 0 0.3 0.3 -0.3 -0.3 0.5 -0.2 -0.1 -0.1 -0.1 -0.1
F -0.4 -0.1 -0.1 -0.2 -0.2 0 0 -0.2 0.3 0 -0.1 -1 0.3 0.6 -0.3 1.2 0.3 -0.1 -0.3 -0.1
I -0.1 0 0 0 0 0 0 -0.1 0 0 0.5 -0.2 0.2 0 -0.1 -0.1 -0.1 0.3 0 0
L -0.1 0 -0.1 0 -0.1 0 0 0.1 0 0 -0.3 0.5 -0.5 0 0.1 -0.3 0.3 -0.1 -0.1 0.6
V -0.1 0 0 0 0 0 0 -0.1 0 0 0.2 0.1 0.2 0.3 -0.1 -0.3 -0.1 -0.2 0.3 -0.1
M 0.3 0 -0.1 0 0 0 0 0.1 0 0 -0.1 -0.2 -0.3 -0.2 0.4 -0.1 0.2 0.3 0.3 -0.1
W 0 0.1 0.4 0.3 0.4 0.1 -0.1 0.8 -0.3 -0.1 -0.4 -0.7 0.9 -0.3 -0.3 1.1 -0.1 -0.4 -0.9 -0.4
Y 0.5 -0.1 0.2 -0.1 -0.3 0 0 -0.1 0 0 -0.1 -0.3 -0.6 0.6 0.1 -0.2 -0.3 -0.2 1.2 0
D 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.2 0 0.4 0 0 0 0
E -0.2 -0.1 -0.1 -0.1 0.3 0 0 0.2 0.3 0 -0.2 -0.2 -0.5 -0.3 0.2 0.7 0.2 0.1 -0.1 -0.1
K 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.5 -0.1 -0.2 0 -0.1 0 0
R 0.5 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 -0.2 -0.1 -0.2 -0.1 0 -0.1 0.2 0.5 0
H -0.1 0 0 0 0 0 0 -0.1 0 0 0.4 -0.1 0.7 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 0
N 0.4 0.2 -0.1 -0.1 0 -0.1 0 -0.3 -0.1 0 -0.5 0.1 -0.2 0.3 0.1 -0.4 0.8 0.2 -0.2 0.4
Q 0.1 -0.1 -0.1 0 -0.1 0 0 -0.2 0 0 -0.2 1.1 0.4 -0.5 -0.3 -0.4 -0.1 0.6 -0.1 -0.1
S -0.1 0 0 0 0 0 0 -0.1 0 0 -0.1 0.6 0.1 0.1 0.2 -0.3 -0.1 -0.1 -0.1 0
T -0.1 0 -0.1 0 0 0 0 -0.1 -0.1 0 0.7 0.2 0.2 -0.1 -0.2 0.3 -0.1 0 -0.1 -0.1
G -0.1 0 0 0 0 0 0 0 0 0 0 0.6 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
C -0.1 0.3 0 0 0 0 0 0.4 0 0 -0.1 0.1 -0.1 -0.2 -0.1 -0.2 -0.1 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0267 0.2 -0.5 0.1 -0.2 -0.1 0.5 -0.3 0.7 -0.3 0 -0.3 0.3 -0.2 1.2 -0.1 0 0.4 0.1 -0.6 -0.1
0308 0.3 0.1 -0.2 -0.4 -0.2 -0.4 -0.5 0.2 -0.2 -0.5 -0.2 0.6 0 -0.2 0.2 0.7 0.8 0.2 0.2 -0.1
Select residue pair below:
i_j Score Prob
0267_0305 1.805 1.00
0267_0312 1.454 0.99
0267_0313 1.271 0.98
0067_0267 1.189 0.97
0085_0267 0.950 0.87
0139_0267 0.914 0.84
0075_0267 0.873 0.80
0267_0302 0.871 0.80
0267_0308 0.767 0.66
0125_0267 0.755 0.64
Local Interactions:
i_j Score Prob
0267_0269 1.027 0.92
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0105 seconds.