May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [C:0266] and [G:0320]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.1 -0.1 0.2 0 0.1 0 -0.1 0.6 0 -0.1 -0.2 0.5 0.7 -0.2 -0.1 -0.2 -0.4 0 -0.3
F 0.2 0.3 0.1 -0.3 0.5 0 0 -0.1 -0.4 -0.1 0.1 -0.6 -0.7 -0.1 -0.3 0.6 0.1 1.2 0 0.1
I -0.1 0.4 -0.1 -0.1 -0.1 -0.1 0 0.2 -0.2 0 -0.1 0.2 -0.3 0.1 -0.1 -0.3 -0.1 0.3 0 0.5
L 0.9 0 -0.3 0.3 -0.1 -0.4 -0.1 0.2 -0.2 0.4 0.5 0 0 0.6 -0.3 0 -0.4 0.3 -0.1 -0.6
V -0.2 0.3 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.4 0 -0.1 1.4 -0.3 -0.5 -0.1 -0.2 0 -0.5 0 1.2
M 0.1 -0.1 -0.1 -0.1 0 -0.1 0 0.8 1.5 0 -0.1 -0.2 -0.2 -0.2 -0.1 0.1 -0.1 -0.8 0 -0.3
W 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 -0.1 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 -0.1 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 -0.1 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 -0.1 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 -0.1 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0.2 0 -0.1 0 -0.1
H 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 0
N -0.1 0 0 0 0 -0.1 0 0 -0.1 0 0 0 0.3 -0.3 0 0.8 -0.2 -0.2 0 -0.1
Q 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0.4 -0.2 0 -0.1 0 0
S -0.7 -0.3 0.4 0 -0.1 -0.4 -0.1 -0.3 0.8 -0.1 0 -0.1 0.6 0.6 1.2 -0.5 -0.3 0.4 -0.1 -0.3
T -0.2 0 0.5 0.5 -0.1 0.5 0 -0.1 -0.1 -0.1 -0.1 -0.3 -0.5 0.9 -0.3 0.3 0.1 -0.1 0 -0.5
G -0.1 -0.1 -0.1 0.8 -0.1 -0.2 0 -0.1 -0.2 0 -0.1 -0.1 1 -0.7 0.2 0 -0.1 0.1 0 -0.1
P 0.4 0 0 0 0 0.8 0 0 -0.2 0 0 0 -0.1 -0.4 0 0.1 0 -0.3 0 -0.1
C -0.2 -0.3 -0.2 -0.8 -0.1 0.1 -0.2 -0.3 -0.3 -0.2 -0.3 -0.2 0 0.3 -0.3 0.8 1.4 0.8 -0.2 0.8

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0266 0.6 0.8 0.2 1.1 0.4 0.2 -0.8 -0.8 -0.8 -0.8 -0.8 -0.6 -0.7 -0.3 -0.6 1.4 0.9 0.4 -0.1 0.9
0320 0.1 -0.1 0 0.1 -0.5 -0.1 -0.8 -0.2 0.3 -0.6 -0.4 -0.1 0.2 1 0.2 1.4 0.2 0.3 -0.8 0.3
Select residue pair below:
i_j Score Prob
0096_0320 1.182 0.97
0312_0320 0.850 0.77
0317_0320 0.845 0.77
0255_0320 0.822 0.74
0266_0320 0.806 0.72
Local Interactions:
i_j Score Prob
0319_0320 1.001 0.90
0320_0322 0.754 0.64
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0212 seconds.