May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0259] and [Y:0316]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.4 -0.1 0.1 -0.1 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0 0.3
F 0 0.2 -0.2 1.4 -0.1 0.4 0 -0.7 0 0 0 0 -0.2 0 -0.1 0 -0.1 0.2 0 -0.1
I -0.1 0.3 0.1 -0.1 0.2 -0.2 -0.3 0.5 -0.1 0.2 0.2 0.2 0.5 -0.1 0.1 -0.1 -0.2 -0.3 -0.1 0.7
L -0.1 -0.9 1 0.7 0.7 0.1 -0.2 0.4 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 0.2 -0.1 0 -0.1 -0.2
V 0 1.4 -0.4 -0.2 -0.3 -0.1 0.2 1.7 0 -0.1 -0.1 -0.1 -0.2 -0.1 -0.2 -0.1 0.2 -0.2 0 -0.3
M 0 0.4 -0.1 -0.1 -0.1 -0.1 0.4 0.2 0 0 0 0 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.7
W 0 -0.1 0 -0.1 0 0 0 -0.5 0 0 0 0 0 0 0.5 0 0 0 0 0
Y 0 -0.2 -0.1 -0.2 0 0 0 0.5 0 0 0 0 -0.1 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.3 0 -0.2 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0.5 0 -0.1
Q 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0.5 0 -0.2 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1
T 0 -0.4 -0.1 -0.2 -0.1 0 0 0.1 0 0 0 0 0 0.4 0 0.2 0.6 -0.1 0 -0.1
G 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.2 0 -0.2 0 0 0 -0.1 0 0 0 0 0.5 0 0 0 0 0 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0259 0.3 0.8 2.1 1.8 1.3 0.7 -0.7 -0.3 -0.8 -0.7 -0.8 -0.8 -0.5 0.1 -0.7 0.2 0.2 -0.5 -0.7 -0.3
0316 -0.5 0.8 -0.1 -0.1 0.1 -0.1 0 1.2 -0.5 -0.3 -0.3 -0.2 0.2 -0.2 -0.1 -0.1 0.2 -0.1 -0.5 0.8
Select residue pair below:
i_j Score Prob
0091_0316 1.231 0.98
0230_0316 0.987 0.89
0259_0316 0.975 0.89
0312_0316 0.918 0.84
0234_0316 0.838 0.76
0143_0316 0.785 0.69
0089_0316 0.749 0.63
Local Interactions:
i_j Score Prob
0316_0317 0.853 0.78
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0232 seconds.