May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0238] and [L:0241]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.3 0.3 0.4 1.1 0.3 0.7 -0.1 -0.2 -0.1 -0.1 -0.1 0 0.1 -0.1 -0.3 -0.6 0.3 -0.1 -0.1 -0.2
F 1.1 -0.3 0.7 -0.3 0.2 0 -0.1 -0.2 0 0 -0.1 -0.3 0 -0.1 -0.1 -0.3 1 -0.1 -0.1 -0.3
I -0.5 0 0.5 1.1 0 -0.3 0.7 0.3 -0.1 -0.1 -0.1 -0.5 -0.1 -0.2 -0.3 0.7 -0.1 -0.2 -0.1 0
L 0.9 -0.6 0.4 0.3 0.1 -0.7 -0.2 0.7 -0.1 -0.1 -0.1 0.5 -0.1 0.2 0.8 -0.7 0.9 -0.2 -0.1 -0.5
V -0.7 0.5 0.8 0.8 0.5 0.3 -0.1 0.2 0 0.1 -0.1 0.2 0 -0.1 -0.2 -0.3 -0.5 -0.1 -0.1 -0.4
M 0.2 -0.1 -0.4 0.4 0.1 0.1 0 -0.1 0 0 0 -0.1 0 0 -0.1 0.3 -0.2 0 0 -0.1
W -0.2 -0.1 -0.7 -0.3 1.3 0 0 -0.1 0 0 0 0.3 0 0 -0.1 -0.1 -0.2 0 0 -0.1
Y 1.1 -0.4 -0.3 -0.9 0.4 -0.8 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 0.3 -0.2 -0.3 0.4 -0.1 1.6
D 0 0 -0.2 0 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 -0.4 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.2 0.4 0 -0.9 -0.7 -0.2 0 -0.1 0 0 0.5 -0.1 0 0 -0.1 1.4 0.1 0 0 -0.1
R 0.2 0.1 -0.7 0.1 -1.1 -0.1 -0.1 0.6 0 0 -0.1 0.4 0 0.4 0.6 -0.2 0.3 -0.1 0.4 -0.2
H -0.1 0 -0.4 -0.4 -0.4 -0.1 0 0 0 0 0 0 0 0 0 0.9 -0.1 0 0 0
N -0.1 0 -0.2 -0.3 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 -0.3 -0.6 -0.3 0.4 0 0 0 0 0 0.4 0 0 0 0.2 -0.1 0 0 0
S -0.1 0.6 0.1 0.6 0.7 0.1 -0.1 -0.2 0 0 -0.1 0.2 0 -0.1 -0.1 -0.5 -0.4 -0.1 -0.1 -0.1
T -0.2 -0.3 0.7 0.2 -0.3 1.2 -0.1 -0.2 0 0 -0.1 -0.3 0 -0.1 -0.2 -0.4 -0.2 0.4 0 0.3
G -0.4 0.6 0.1 1.2 0.2 0.1 0 -0.1 0 0 0 -0.2 0 -0.1 -0.1 -0.3 -0.3 -0.1 -0.1 -0.1
P 0 0 -0.2 -0.5 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.2 -0.2 0.7 0.1 -0.1 -0.1 0 -0.1 0 0 0 -0.1 0 -0.1 -0.1 0.2 -0.2 0 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0238 1.3 1 1.2 2 1 -0.1 -0.3 0.8 -1.4 -1.6 -0.4 0.7 -1.1 -1.4 -1.1 0.8 0.7 0.3 -1.5 -0.1
0241 0.7 0.1 1.1 1.6 0.8 0.6 -0.7 0.1 -0.8 -0.8 -0.6 0.7 -0.8 -0.6 -0.1 0.6 -0.1 -0.6 -0.6 -0.4
Select residue pair below:
i_j Score Prob
0238_0253 1.388 0.99
0238_0241 0.900 0.82
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0201 seconds.