May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [T:0235] and [F:0236]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 0.7 0.6 0 0 0.1 0 -0.4 -0.1 -0.2 -0.2 0 0.4 -0.1 -0.1 -0.1 0.4 -0.6 -0.2 -0.1
F -0.5 -0.2 -0.1 0.4 -0.2 -0.4 0.3 1 -0.3 -0.2 0.1 -0.1 0.6 0.2 -0.1 -0.2 0.1 -0.2 -0.2 0
I -0.4 -0.2 -0.7 0.8 0.3 0.1 -0.4 0.2 -0.4 0.5 -0.1 0.3 -0.7 0.1 0.5 0.5 -0.2 0 0.2 0.7
L 0.2 -0.4 0.3 0.9 0.7 0.2 0.3 -0.3 -0.3 0.2 0.2 0.1 -0.6 -0.1 -0.4 -0.6 0.2 0.6 -0.1 -0.2
V -0.2 -0.1 0.2 0.7 -0.2 0.1 -0.4 0.2 -0.4 0.2 0.5 0.2 -0.5 -0.2 0.4 0.2 -0.2 -0.4 0.2 0.5
M 0.6 -0.4 -0.4 -0.2 0.4 0.4 -0.2 -0.1 0.4 -0.1 0.5 -0.1 -0.2 -0.2 -0.3 -0.2 -0.2 -0.1 -0.1 0.2
W 0 -0.4 -0.1 -0.7 0.1 0 0.1 -0.1 -0.1 -0.1 0.9 1 0.2 0.4 -0.3 -0.4 -0.2 0 -0.1 -0.1
Y -0.8 0.6 -0.6 -0.4 -0.7 -0.2 0.1 -0.2 -0.2 -0.1 1.1 -0.1 1.4 0.2 0.3 0.8 -0.2 -0.2 -0.1 -0.7
D -0.1 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 0 0 0 0
E -0.1 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 0 0 0 0
K 0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0 0 0 0 0.2 0.1 -0.1 -0.1 -0.1 -0.2 0 -0.1 0 -0.1
R 0.7 -0.3 -0.3 -0.8 -0.5 -0.2 -0.1 -0.1 -0.1 0 0.4 0.1 0.1 -0.1 0.5 -0.1 -0.1 1.2 0 -0.3
H 0.1 -0.3 -0.2 -0.2 -0.2 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.1 0.3 0.3 0.2 0 -0.1 0.1 0 -0.2
N -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0 0 0 0 -0.2 0.1 -0.1 -0.1 -0.1 0 0 0.4 0 -0.1
Q -0.3 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 0 0 0 -0.1 0.8 -0.1 -0.2 0.5 -0.4 -0.1 0.3 0 -0.2
S 0 -0.1 0.9 0.4 0.2 0.2 -0.2 -0.2 1 -0.3 -0.7 -0.1 -0.2 -0.2 0.8 -0.3 -0.1 -0.3 -0.2 0.6
T 0.3 1.4 0.1 0.4 0.2 0 -0.7 -0.4 0.1 -0.2 -0.2 -0.2 0 -0.7 -0.6 0.8 -0.1 0.1 0.3 0.4
G 0.5 0.8 0.1 0.2 0.4 0.8 0.7 0.3 -0.3 -0.2 -0.4 -0.8 -0.5 0.3 -0.6 -0.1 0.7 -0.5 -0.2 0
P -0.1 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.2 0 0 0.1 -0.1 0 0 0 0
C -0.1 -0.3 0.5 0.5 0.3 -0.5 0.3 -0.3 0 -0.2 -0.6 0.1 0 0.1 -0.1 1 0.2 0 -0.2 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0235 1.2 0.5 1.5 1.1 1.5 -0.1 0.1 0 -1.6 -1.6 -1.3 -0.5 -0.9 -1.4 -1.1 1.6 1.1 1.5 -1.5 1
0236 0.8 0.2 0.6 1.1 0.7 0.2 -0.8 -1 -1.4 -1.5 1.5 1.7 0.1 -0.5 0.3 0.7 -0.3 0.2 -1.5 0.1
Select residue pair below:
i_j Score Prob
0232_0236 2.705 1.00
0236_0239 1.081 0.94
Local Interactions:
i_j Score Prob
0235_0236 0.745 0.63
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0167 seconds.