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Coupling matrix for [M:0230] and [Y:0316]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.2 -0.1 0.2 0.3 -0.1 -0.1 -0.3 0 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 0.4 0 0.3
F 0 0.2 -0.1 -0.2 -0.1 0 -0.1 -0.1 0 0 0 0 0.4 0 -0.1 0.4 -0.1 0 0 0.3
I -0.1 -0.6 0.5 0.7 0.3 -0.3 -0.2 0.7 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.1 -0.1 0.1 -0.2 -0.1 -0.1
L -0.1 0.1 -0.2 -0.9 0.1 0.3 0.6 0.7 -0.1 0.2 0.1 -0.2 0.3 -0.3 -0.2 0.1 -0.1 -0.3 -0.1 0.4
V 0 1.5 -0.2 -0.5 -0.1 -0.1 -0.1 0.7 0 -0.1 -0.1 0.3 0.1 -0.1 0.3 -0.1 -0.1 -0.2 0 -0.5
M 0 -0.4 -0.3 -0.2 -0.2 -0.1 0 1.1 0 0 0 0 -0.4 0.4 -0.1 -0.1 -0.2 -0.1 0 0.5
W 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 0 0 0 0 0 -0.3 0 0 0 0 0.4 0 0 0 0 0 0 0
Q 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0.1 0.4 0.4 0 0.3 0 -0.4 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1
T 0 0.3 0 1 -0.2 -0.1 -0.1 0.2 0 0 0 0 -0.2 0 0 -0.1 -0.1 0.4 0 -0.4
G 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.3 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0230 0.8 0.6 0.8 0.8 1.2 -0.7 -0.6 -0.6 -0.4 -0.4 -0.6 -0.4 -0.6 -0.2 -0.4 0.8 0.9 -0.6 -0.4 -0.4
0316 -0.5 0.8 -0.1 -0.1 0.1 -0.1 0 1.2 -0.5 -0.3 -0.3 -0.2 0.2 -0.2 -0.1 -0.1 0.2 -0.1 -0.5 0.8
Select residue pair below:
i_j Score Prob
0230_0260 1.344 0.99
0136_0230 1.179 0.97
0137_0230 1.034 0.92
0139_0230 1.010 0.91
0230_0316 0.987 0.89
0085_0230 0.910 0.83
0230_0333 0.845 0.77
0230_0263 0.838 0.76
0230_0234 0.807 0.72
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
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