May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0216] and [L:0217]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.4 0 0.3 0 -0.1 -0.5 -0.1 -0.1 -0.3 -0.4 -0.1 -0.1 -0.1 0.1 0.7 0.1 -0.2 -0.1 0.2
F -0.1 -0.2 -0.2 0.2 -0.5 -0.7 -0.6 0.1 -0.1 0.1 1.1 -0.2 -0.1 0.3 1.3 0.6 -0.5 -0.1 -0.2 0.3
I 0.5 0.4 -0.3 -0.1 0.3 -0.3 -0.8 0.6 -0.1 0 -0.3 -0.2 -0.1 -0.2 -0.6 0.5 0.5 0.6 -0.2 0.9
L -0.1 0 -0.3 -0.3 0.2 0.7 -0.3 1 -0.2 -0.3 0.9 0.4 -0.2 0 0.3 0.4 0.3 -0.1 0 -0.6
V 0.2 0.3 -0.2 0 -0.3 0.1 -0.4 -0.3 -0.1 1.1 -0.5 0.1 -0.1 -0.1 -0.8 0.8 0.3 0.7 -0.2 0.6
M 0.7 0.5 0.2 -0.1 0.5 0 -0.1 -0.4 -0.1 0.1 0.1 -0.1 -0.1 -0.1 -0.4 -0.3 0.5 -0.1 -0.1 0.1
W -0.4 0.3 0.3 -0.2 0.1 0.6 2.4 -0.1 -0.1 -0.4 -0.5 -0.2 -0.1 -0.1 -0.5 -0.3 0.6 0.2 -0.1 0
Y 0.6 0.2 0.3 -0.4 -0.1 -0.1 -0.6 0.6 -0.1 0.3 -0.1 -0.1 -0.1 -0.2 1.3 -0.3 -0.3 0.2 -0.2 -0.5
D -0.1 -0.1 0 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1
E -0.2 -0.2 0.1 0.6 0.1 -0.1 0 -0.1 0 0 -0.1 0 0 0 -0.1 -0.2 -0.2 -0.1 0 -0.1
K 1 0.1 -0.1 0.3 0.3 0.2 -0.2 -0.2 0 -0.1 -0.1 0 0 0 -0.2 -0.3 0 -0.1 0 -0.3
R -0.1 -0.1 0.6 -0.3 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 -0.1
H 0.4 0.3 0.1 0.1 0.8 -0.2 -0.1 -0.1 0 -0.1 -0.1 0 0 0 -0.1 -0.3 -0.1 -0.1 0 -0.3
N 0.3 -0.2 -0.2 -0.1 -0.3 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.2 -0.2 -0.1 0 0.8
Q -0.2 -0.4 0.4 0.1 0.1 -0.2 -0.1 0.3 0 -0.1 -0.1 0 0 0 -0.1 -0.2 -0.3 0.4 0 0.2
S -0.4 0.2 -0.1 0.7 0.3 0.7 -0.2 -0.1 0 -0.2 0.8 -0.1 0.2 -0.1 0.4 -0.3 -0.4 -0.3 -0.1 -0.5
T -0.2 0.1 -0.8 -0.1 0.6 -0.2 1.5 -0.1 -0.1 0.1 -0.2 -0.1 -0.1 -0.1 0.4 0 -0.2 -0.4 -0.1 0.2
G 0.2 0.6 0.5 -0.4 -0.4 0.1 -0.3 -0.4 0 -0.2 -0.2 -0.1 0 -0.1 -0.4 0.1 0.6 -0.3 -0.1 0.6
P -0.2 -0.2 0.2 0.4 0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 0 -0.1 0.2 0 -0.1 0 -0.2
C -0.3 -0.6 0.3 1 -0.1 0.1 0.3 -0.3 0 -0.1 -0.1 0 0 0 0.1 0.3 -0.5 -0.2 0 -0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0216 0.9 0.8 1 1.9 0.9 0.5 1.3 0.8 -1.6 -1.3 -0.3 -1.5 -0.7 -1.3 -0.9 0.5 0.8 -0.1 -1.1 -0.5
0217 1.2 1.1 1.6 2.1 1.4 0.3 -0.6 0.3 -1.9 -0.8 -0.7 -1.6 -1.8 -1.7 -0.2 0.8 1.1 -0.1 -1.6 0.5
Select residue pair below:
i_j Score Prob
0213_0217 0.761 0.65
Local Interactions:
i_j Score Prob
0216_0217 0.764 0.66
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0123 seconds.