May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [I:0178] and [S:0179]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.4 0.7 -0.1 0.2 0.6 -0.1 -0.3 -0.1 -0.2 -0.2 -0.6 -0.4 -0.1 -0.5 0.6 0.2 0.2 0.2 0.8
F 0.2 -0.2 -0.8 -0.4 -0.7 0.1 0.3 0 1 -0.3 -0.1 0.3 -0.1 1 -0.6 0.5 0.3 -0.1 0.2 0.2
I -0.5 0.5 -0.2 -0.8 0.2 0.7 -0.1 0.3 0 0 -0.1 0 0.5 -0.1 -0.6 0.4 0 -0.2 0.5 0.2
L 0.9 0.1 -0.6 -0.5 -0.3 0.1 -0.3 0.5 -0.7 0.2 -0.3 0.8 0.1 -0.8 -0.5 0.9 0.5 0.2 0.5 0.7
V -0.2 0.3 0.1 -0.1 -0.2 0.1 -0.1 0 -0.3 -0.2 -0.5 0.1 0.6 0.6 -0.1 0.4 0.6 0.2 -0.4 0
M 0.5 -0.3 0.4 -0.5 -0.3 0.4 -0.1 0.2 -0.2 -0.2 0.5 0.2 -0.5 0.1 0.1 -0.3 0.3 0.3 -0.4 0.1
W 0.8 -0.1 -0.3 -0.3 0.7 -0.4 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 0 -0.2 0.3 -0.5 0.6 -0.2 0.3
Y -0.3 -0.2 -0.3 -0.3 -0.2 -0.4 0 -0.1 -0.1 -0.1 0.2 0.2 -0.2 1.8 -0.2 0.2 0.2 -0.2 -0.2 0.3
D 0.2 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 0 -0.1 0 -0.3 -0.2 -0.1 0 -0.1
E -0.5 -0.1 0.3 1.2 0.2 -0.2 0 0 -0.1 0 -0.1 -0.1 -0.2 -0.2 -0.1 0.1 -0.4 -0.2 -0.1 -0.2
K -0.4 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 0 0.5 -0.1 -0.2 0.2 0.6 0.4 -0.4 -0.3 -0.2 -0.1 -0.2
R -0.2 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.1 0 -0.3 -0.2 0.4 0 -0.1
H -0.5 -0.1 -0.1 -0.1 0.2 -0.2 0 -0.1 0 0.5 -0.1 -0.1 -0.1 -0.2 2.1 -0.7 -0.4 -0.2 -0.1 -0.2
N 0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.1 0 -0.3 0.2 -0.1 0 -0.1
Q -0.8 -0.1 0.2 1.6 0.1 -0.4 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 0.2 -0.1 0.2 0.4 -0.3 -0.1 -0.3
S 0.1 -0.3 0.3 -0.2 0.4 -0.5 -0.1 0.2 0.2 0.3 0.7 0.4 -0.3 -0.5 0 0.3 0.4 -0.3 -0.5 -0.2
T 0.4 -0.3 0.2 -0.4 0.1 0.2 -0.1 -0.2 -0.2 -0.1 0.9 -0.3 0.2 -0.1 -0.3 0.4 -0.2 0.1 -0.3 0.1
G -0.9 1 0.4 0.2 0.4 0.6 -0.1 -0.2 -0.2 -0.1 0 -0.4 1.2 -0.5 -0.3 0.1 0 -0.4 -0.4 -0.1
P 0.1 -0.1 0.1 0.5 -0.2 0 0 -0.1 -0.1 -0.1 -0.2 0.9 -0.2 -0.6 0.3 -0.7 0 -0.2 1.4 -0.6
C 0.9 0.4 -0.2 0.4 0.3 -0.2 -0.1 -0.2 0.3 -0.1 0 -0.4 -0.4 -0.1 0.7 -0.5 -0.5 0.6 -0.4 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0178 1.3 1.4 1.6 2.4 1.2 0.7 -0.2 0 -1.8 -1.1 -1.2 -1.8 -0.9 -1.7 -0.4 0.8 0.4 0.7 0 0.7
0179 0.2 -0.2 0.1 0.1 0.8 0.2 -1.2 -0.5 -1 -0.3 0.4 0.3 -0.3 0.9 -0.1 1.2 0.9 0 -0.8 0.6
Select residue pair below:
i_j Score Prob
Local Interactions:
i_j Score Prob
0178_0179 0.758 0.65
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0195 seconds.