May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [T:0151] and [F:0154]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.5 -0.1 -0.6 0.6 0 -0.2 -0.6 -0.3 -0.2 0.4 -0.2 0 -0.2 -1 0.1 0.2 0.6 0.8 -0.1
F -0.7 0.1 -0.8 -0.9 -0.3 0 -0.6 -0.1 -0.1 0.4 1.3 0.2 0.3 0.1 0.8 -0.1 0.6 -0.2 0.1 0.8
I 0.3 0.1 0.1 0.3 -0.4 0.7 -0.7 0.1 -0.2 -0.1 -0.3 0.1 -0.2 0.1 0.2 0.2 0 -0.2 0.8 -0.3
L 0 -0.2 -0.5 0.2 -0.6 -0.4 -0.3 -0.7 -0.2 -0.3 0.6 1 0.1 0.8 0.5 0.1 -0.1 0.6 -0.1 -0.1
V 0.1 0.2 0.3 0.5 0.4 1.4 -0.2 0.9 -0.1 -0.4 -0.9 0.1 -0.1 -0.1 0 -0.8 0.3 -0.1 -0.5 -0.3
M 0.4 0.1 0.3 -0.4 -0.1 -0.1 0.1 -0.2 0.3 0.2 0 0.5 0.3 -0.3 0.3 0.2 -0.6 0.3 -0.3 -0.3
W 0.3 -0.1 -0.1 -0.3 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 0.2 0.3 -0.3 -0.1 -0.2 0.1 0.3 -0.1 -0.2 0
Y -0.3 0.3 0.6 -0.4 -0.1 -0.2 -0.2 0 -0.1 -0.1 -0.4 -0.3 -0.4 0.6 1.1 -0.1 0.2 -0.2 -0.2 0
D -0.1 -0.1 -0.1 0.3 0 -0.1 -0.1 -0.1 0 0 -0.2 -0.2 -0.1 -0.1 -0.1 -0.2 0.4 0.4 -0.1 0
E 0.2 -0.1 0.3 0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.3 0.2 -0.3 -0.1 0.1 0.6 -0.2 -0.1 -0.2 0
K 0 -0.2 -0.3 0.1 -0.2 0.2 -0.3 -0.3 -0.1 -0.1 0.4 -0.6 -0.6 0.7 0.4 0.9 -0.3 0.5 -0.3 -0.1
R -0.2 1.3 -0.2 0.2 -0.4 0.7 0.8 -0.4 0.1 0.2 -0.4 -0.6 -0.8 0 -0.6 0.3 0 -0.4 -0.1 -0.1
H 0.1 -0.1 0.9 -0.1 0.6 -0.1 -0.3 0 0.3 -0.1 0.6 -0.2 -0.2 -0.4 -0.6 -0.5 -0.4 -0.4 0.6 0.1
N 0.3 -0.1 -0.3 -0.1 0.1 -0.3 0.1 -0.4 -0.2 -0.1 -0.4 0.1 0.4 -0.3 0 -0.1 0.4 0 0.6 0.4
Q 0.4 0 -0.4 0.5 -0.3 -0.4 -0.3 0.9 0.2 0.3 -0.1 0.1 1 -0.4 -0.5 0.2 -0.4 -0.1 -0.5 -0.1
S 0.2 -0.2 -0.3 -0.2 -0.1 -0.5 1.1 -0.2 0.5 0.2 0.2 0.3 0.8 -0.3 0.3 0.2 -0.2 -0.4 -0.3 -0.2
T 0.3 0 0.3 0.1 1.2 -0.6 -0.2 0.7 -0.2 -0.4 0 -0.6 -0.4 0.4 0.2 0.3 -0.1 0 -0.3 -0.2
G -0.2 -0.2 -0.2 0.9 -0.2 0 -0.2 0.2 -0.1 -0.1 0 0.1 0.3 0 -0.3 -0.3 -0.2 0.1 0.1 0
P -0.3 -0.2 0.3 0.4 -0.2 -0.2 0.3 -0.2 -0.1 -0.1 -0.1 0.6 0.3 -0.2 -0.1 -0.1 -0.2 0.2 -0.1 0
C -0.1 -0.1 0.2 -0.2 -0.1 -0.1 -0.1 0.8 0 0 -0.2 -0.1 0.4 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0151 0.6 0 0.4 0.5 0.6 0.2 -0.8 -0.6 -1 -0.4 0.1 0.8 -0.2 0 0.1 0.8 0.9 -0.2 -0.3 -1
0154 0.3 -0.2 0 0.8 -0.4 -0.3 -0.5 0.1 -1 -1.1 0.7 1.2 0.9 -0.1 0.8 0.8 -0.1 0 0.1 -1.4
Select residue pair below:
i_j Score Prob
0151_0154 0.980 0.89
Local Interactions:
i_j Score Prob
0153_0154 0.967 0.88
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.031 seconds.