May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0150] and [K:0152]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.4 -0.3 -0.6 -0.6 -0.1 -0.7 0.5 -0.5 1.4 0.2 -0.3 0.2 0.5 0.4 0.5 0 -0.5 0.5 0.2
F -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 1.3 0.2 -0.4 -0.2 -0.2 0.1 -0.3 0.3 -0.2 0.2 0.4 0
I -0.1 -0.1 0.4 -0.2 -0.1 -0.1 -0.1 -0.1 -0.3 0.3 0 -0.4 -0.1 -0.2 0.2 -0.3 -0.2 -0.2 0.3 0
L -0.3 -0.2 0 -0.3 0.4 0.5 0.3 -0.1 1.1 -0.2 -0.2 -0.7 -0.3 0.1 -0.2 -0.4 -0.4 0.1 0.8 -0.1
V 0.1 0.2 0.3 0.5 0 0.8 -0.2 -0.2 0 -0.4 0 0.3 -0.3 -0.3 -0.5 0.4 0 -0.4 -0.4 -0.1
M 0.3 0.3 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 1 0.1 -0.3 -0.4 -0.2 -0.1 -0.2 -0.4 -0.2 -0.2 0.6 0
W -0.2 0.7 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.3 1 0.2 -0.1 -0.1 -0.3 -0.1 0.1 -0.3 -0.1
Y -0.1 -0.1 -0.1 0.3 0 -0.1 0 0 -0.1 -0.1 -0.2 0.1 -0.1 0 -0.1 -0.1 -0.1 0.4 -0.1 0
D -0.1 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 0.4 0
E 0 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0.3 -0.2 0 0 -0.1 -0.1 0.4 -0.1 -0.1 0
K -0.3 0.6 -0.3 0 -0.1 -0.2 0.4 -0.1 0 -0.2 0 0.3 0.1 0.3 -0.4 -0.6 0.2 0.5 -0.3 -0.1
R 0.2 -0.2 0.2 0.8 -0.2 -0.2 -0.2 0.6 -0.3 -0.3 0.1 0.5 -0.4 0.2 0.6 -0.6 -0.3 0.1 -0.4 -0.1
H 0.2 0.2 -0.2 -0.4 0.3 -0.1 -0.1 -0.2 0.4 -0.3 -0.5 -0.3 1 -0.2 -0.4 0.9 0.2 -0.4 0.5 -0.1
N -0.2 0 -0.2 0 -0.1 0.6 -0.1 0.3 -0.3 -0.2 -0.1 -0.1 0.1 -0.2 0 0 0.6 -0.3 0.6 -0.1
Q -0.1 -0.1 0.4 -0.2 -0.1 -0.1 -0.1 0.4 -0.3 0.1 0.5 -0.1 -0.1 0.3 -0.3 0 -0.2 -0.2 -0.2 -0.1
S -0.2 0.1 -0.1 0.3 0.1 -0.5 -0.4 -0.1 -0.1 0.2 0.2 0.2 0.2 0.4 -0.1 -0.4 0 0.8 0 0.3
T -0.3 -0.3 -0.3 -0.5 -0.2 0.3 -0.1 -0.2 -0.7 -0.1 0.6 0.1 -0.4 0 0.3 1.2 0.9 0.2 0.2 -0.2
G 0.7 -0.3 -0.2 0.3 -0.2 0.2 -0.2 -0.2 -0.2 0.5 0 0.2 0.2 -0.3 0.8 0.4 -0.3 -0.4 -0.4 -0.1
P 0.4 -0.3 0.6 0.6 0.5 -0.7 1.4 -0.5 -0.4 -0.8 1 0.7 0.5 -0.3 -0.2 0.2 0.3 0.4 -1.6 -0.1
C -0.1 -0.1 0 -0.1 0.5 0 0 0 0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0150 0.5 -0.2 -0.3 0 0.7 -0.2 -0.7 -0.7 -0.8 -0.8 0.2 0.4 0 0.2 -0.1 1.3 0.3 0.3 1.2 -0.8
0152 0 -0.5 -0.5 0.2 -0.5 -0.2 -1 -0.5 0.5 -0.1 1.1 1.3 0 -0.1 0.4 0.8 0 0 0.3 -1.2
Select residue pair below:
i_j Score Prob
0146_0150 1.088 0.94
0147_0150 0.998 0.90
0150_0158 0.779 0.68
Local Interactions:
i_j Score Prob
0150_0151 2.450 1.00
0150_0152 1.132 0.96
0149_0150 0.909 0.83
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0122 seconds.