May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [R:0143] and [Y:0234]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 0 -0.1 0 0 0 -0.3 0 0 0 0 0 -0.1 0 -0.1 0 0 0 0.8
F 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0.1 -0.1 0 0 0 0 0 0
I 0 -0.1 0 0.4 0 0 0 -0.2 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1
L 0.4 -0.2 0 -0.1 0 0 0.5 -0.7 0 0 0 0 0.8 -0.2 -0.1 -0.1 -0.1 0 0 0.2
V 0 -0.1 0 0 0 0 0 0.1 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1
M 0 -0.1 0 -0.1 0 0 0 0.2 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1
W 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 0.4 0 0.3 0 0 0 -0.3 0 0 0 0 -0.1 0.2 -0.1 -0.1 0 0 0 -0.1
D 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
K 0.3 -0.2 0 -0.1 0 0 0 1.1 -0.1 0 0 0 0 -0.2 -0.1 -0.2 -0.1 0 0 -0.2
R -0.5 -0.1 0.2 -0.5 -0.3 0 -0.6 1.2 0.1 -0.2 -0.2 -0.1 0.3 1.2 0.5 1 0.8 0 -0.2 -0.7
H 0 -0.1 0 0.1 0 0 0 0.1 0.1 0 0 0 -0.1 -0.1 -0.1 0.2 0 0 0 -0.1
N -0.1 -0.1 0 -0.1 0.4 0.5 0 -0.4 0 0 0 0 -0.1 -0.2 0 -0.1 -0.1 0 0 0.1
Q 0 0.2 0 -0.1 0 0 0 0.5 0 0 0 0 -0.1 0.4 -0.1 -0.1 -0.1 0 0 -0.1
S -0.1 0.3 0 0.8 0 0 0 -0.2 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1 0 0 -0.1
T -0.1 -0.1 0 -0.2 0 0 0 0.2 0 0 0 0 -0.1 0.1 0 0.4 -0.1 0 0 0
G 0.3 -0.1 0 -0.2 0 0 0 -0.4 0 0 0 0 -0.1 0.3 0 -0.1 -0.1 0 0 0.5
P 0 -0.1 0 0 0 0 0 0.2 0 0 0 0 0 -0.1 0 0 0 0 0 0
C 0 1.1 0 0.5 0 0 0 -0.5 0 0 0 0 -0.2 -0.2 -0.1 -0.1 0 0 0 0.2

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0143 -0.1 -0.5 -0.3 0.5 -0.6 -0.5 -0.7 0.1 -0.7 -0.7 0.2 2.7 -0.1 0.1 0.4 0.2 -0.1 0.1 -0.4 0.7
0234 0.1 1 -0.1 0.6 -0.1 0.1 -0.3 0.1 -0.2 -0.5 -0.4 -0.3 0.2 0.7 -0.4 0.4 0 -0.3 -0.5 0.2
Select residue pair below:
i_j Score Prob
0143_0241 0.919 0.84
0143_0234 0.888 0.81
0143_0316 0.785 0.69
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0218 seconds.