May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [C:0138] and [V:0171]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 -0.1 1.3 0.4 0.3 0.1 -0.1 -0.2 0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.2 -0.2 -0.4 -0.5 -0.5 0.6
F -0.2 -0.3 0.4 0.3 0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.7 0.2 -0.4 0.1 -0.1
I 1 0.2 -0.3 -0.3 0 1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.5 -0.1 -0.1 0.2
L 0.3 -0.2 0.4 0.4 0.9 1.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.2 -0.1 -0.2 -0.1 -0.1 0.5 -0.2 -0.1 0.1
V 0.5 -0.3 0.4 -0.1 0.8 -0.7 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.3 -0.4 0.2 1.1 0.4 0.2
M -0.4 -0.1 0.4 1.1 0.1 -0.3 0 -0.1 0 0 0 0 0 -0.1 0 0.4 -0.6 0.2 0.2 -0.2
W 0.2 -0.1 -0.8 -0.2 -0.1 -0.2 0 0 0 0 0 0 0 0 0 -0.3 1.2 -0.1 -0.1 0
Y -0.7 0.4 0 0.6 -1.1 -0.2 0 0 0 0 0 0 0 0 0 -0.1 1.7 -0.2 -0.1 -0.1
D -0.1 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
E -0.1 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
K -0.1 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
R -0.1 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
H -0.1 0 -0.3 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 -0.1 0.3 0 0 0
N 0.4 1 -0.6 -0.3 -0.6 -0.1 0 0 0 0 0 0 0 0 0 -0.2 0 0.4 0 -0.1
Q 0.3 0 -0.3 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0
S -0.8 -0.1 0.5 -0.4 0.2 0.2 0 0 0 0 0 0 0 0 0 0.7 0.6 -0.2 -0.1 -0.2
T 0.8 -0.2 0.2 -0.3 -0.1 -0.5 0 -0.1 -0.1 0 0 -0.1 0 0.7 -0.1 0.9 -0.4 -0.3 0.1 -0.1
G 0 -0.1 0.3 0.3 0.1 -0.1 0 0.5 0 0 0 0 0 -0.1 0 -0.2 -0.4 0.3 -0.1 -0.3
P -0.1 0 -0.3 -0.1 0.4 0 0 0 0 0 0 0 0 0 0 -0.1 -0.2 0 0 -0.1
C -0.5 -0.4 0.7 0.1 1.5 0.2 -0.1 -0.2 -0.2 -0.1 -0.1 0.2 -0.1 -0.2 -0.1 -0.4 -0.7 0.2 -0.1 0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0138 1.7 1.4 1.2 1.9 1.7 0.4 -0.8 -0.3 -1.2 -1.2 -1.2 -1.2 -1.1 -0.6 -1.1 0.1 0.7 0.5 -1 1.3
0171 1.9 -0.4 2.2 1.6 2.4 0.6 -1.3 -1.1 -1.2 -1.3 -1.3 -1.2 -1.3 -1 -1.1 1.2 1.8 0.1 -0.5 0.4
Select residue pair below:
i_j Score Prob
0138_0171 2.255 1.00
0135_0171 1.039 0.92
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0261 seconds.