May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0136] and [C:0168]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0.5 -0.2 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0
F -0.4 -0.1 0.7 -0.7 -0.1 -0.1 0 0.5 0 0 0 0 0 -0.1 0 0.7 -0.2 0 0 -0.1
I 0.8 0.5 0.1 0.1 0.5 0.1 0.3 -0.4 -0.1 -0.1 -0.1 -0.2 -0.1 -0.6 0.2 0 0.3 -0.2 -0.2 0
L 0.2 -0.1 -0.3 -0.2 0.3 0.1 -0.2 0 -0.2 -0.2 -0.1 0 -0.3 0.1 0.2 0 0.3 0.5 -0.2 0.8
V 0 0.2 -0.1 1 0.2 0.2 -0.1 -0.3 0 0 -0.1 -0.1 -0.1 0.5 -0.1 -0.6 -0.1 -0.1 0.4 -0.1
M 1.2 -0.2 -0.2 0.2 -0.1 -0.2 -0.1 0 0 0 0 0 0 -0.3 -0.1 0.6 -0.2 -0.2 -0.1 0.3
W -0.1 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0.3 -0.1 0 0 -0.1
Y -0.1 0 -0.3 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0.7
D 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
E 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
K 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
R -0.1 0 -0.2 -0.1 -0.1 0 0 0.5 0 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1
H -0.2 0 0.1 0.1 -0.2 0 0 -0.1 0 0 0 0 0.5 -0.1 0 -0.2 0.3 0 0 -0.3
N -0.5 -0.1 0.5 0 1.1 -0.3 0 -0.1 0 0 0 0 0 0 0 -0.1 0.1 0 0 -0.3
Q -0.1 0 -0.4 0.5 -0.2 -0.1 0 0 0 0 0 0 0 0.4 0 -0.1 -0.1 0 0 0.2
S -0.2 0 0.7 -0.3 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0.5 -0.1 0 0 -0.3
T 0 0 0.7 0.3 0.3 0 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.2 0.1 -0.3 -0.2 0.4 -0.1 -0.1 0.1
G -0.2 0 -0.3 -0.3 0.3 0.4 0 0 0 0 0 0 0 -0.1 0 0.2 0.2 0 0 -0.2
P -0.1 0 -0.2 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
C -0.1 0 0.6 -0.2 -0.2 0.4 0 0 0 0 0 0 0 -0.1 0 -0.2 -0.1 0 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0136 -0.4 0 1.8 2 1.1 0.7 -0.7 -0.4 -0.8 -0.8 -0.8 -0.6 -0.1 0.3 -0.1 0 0.8 -0.2 -0.7 -0.2
0168 0.1 0.2 1.5 1.6 1.3 0.4 -0.6 -0.1 -0.8 -0.8 -0.8 -0.7 -0.6 -0.4 -0.6 0.3 0.9 -0.5 -0.5 0.2
Select residue pair below:
i_j Score Prob
0136_0230 1.179 0.97
0099_0136 1.111 0.95
0136_0313 0.984 0.89
0136_0168 0.833 0.75
0136_0256 0.745 0.63
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0165 seconds.