May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [N:0130] and [G:0132]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.1 -0.4 -0.1 -0.2 -0.2 0 0.8 -0.1 0.2 0.9 -0.3 0.3 0.1 -0.3 -0.4 -0.3 -0.2 0.4 -0.3
F -0.1 0 0.1 0.2 0.2 -0.1 -0.1 -0.3 0.3 -0.8 -0.7 0.1 0.6 1.4 0.8 -0.2 -1.2 0 -0.2 0.9
I 0.6 -0.1 0.6 -0.1 -0.1 0.7 0 -0.2 -0.1 -0.3 0.3 0.5 -0.1 -0.2 -0.3 -0.7 0.3 0.1 -0.1 -0.2
L -0.6 -0.1 1.2 -0.1 0.8 -0.3 0 -0.2 0.3 -0.4 -0.3 -0.1 -0.1 -0.2 -0.2 -0.1 0.6 0 -0.1 0.1
V -0.6 -0.1 -0.2 -0.1 -0.1 -0.1 0 -0.1 0 0.2 1.1 0.2 -0.1 -0.1 -0.1 -0.2 0.2 0.3 0 -0.1
M 0.1 -0.1 0.1 0 -0.1 -0.1 0 -0.1 -0.1 0.4 -0.2 0.3 -0.1 -0.1 0.7 -0.1 -0.1 -0.4 0 -0.1
W -0.1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 -0.8 -0.2 -0.2 0 0
Y 0 -0.2 -0.1 -0.2 -0.3 -0.6 -0.1 0.5 0 0.2 -0.6 -0.4 0 -0.2 0 0.8 -0.6 1.1 -0.2 1.3
D 0.1 0 -0.1 0 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0 -0.1 0 -0.1 0.1 0.3 0 -0.1
E -0.2 0 -0.1 0 0 -0.1 0 0 0 -0.1 -0.1 0 0 0 0 0.6 -0.2 -0.2 0 -0.1
K -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 -0.1 -0.1 0 0
R -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.3 -0.1 -0.3 0 0
H -0.4 -0.1 -0.2 0 -0.1 -0.1 0 -0.2 -0.1 1.2 -0.1 -0.1 0 0.4 -0.1 0.4 -0.4 0.1 0 -0.1
N 0.9 -0.1 -0.3 0 -0.1 0.2 0 -0.1 -0.1 -0.2 -0.2 0.2 -0.1 -0.1 -0.1 -0.2 1 -0.2 -0.1 -0.2
Q -0.2 0 0.3 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 0 0.5 -0.3 0 0
S 0.4 0 -0.2 -0.1 -0.1 -0.1 0 -0.1 0.2 -0.2 0.3 -0.1 -0.1 -0.3 -0.1 0.8 0.2 0.1 -0.1 -0.2
T 0.3 0.2 0.1 0.3 0.2 0.3 -0.1 0.4 -0.2 -0.1 0.2 0.1 -0.2 -0.1 -0.3 0.3 0.1 -0.3 0.2 -0.4
G 0 0.4 -0.2 0 -0.1 -0.1 0 -0.1 -0.1 0.2 -0.3 -0.1 -0.1 -0.1 -0.1 0.3 1.2 -0.4 -0.1 -0.3
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 -0.1 -0.2 0 0
C 0.4 0 -0.2 0 -0.1 -0.1 0 -0.1 0 0 -0.2 -0.1 -0.1 -0.4 -0.2 0.3 -0.1 0.7 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0130 1 1.5 0.7 0.6 0.3 0.2 -1 1 -0.6 -0.9 -1.4 -1.1 0 0.3 -0.5 0.5 1.8 0.2 -1.1 -0.4
0132 1.3 -0.4 0.9 -0.6 -0.2 0.3 -0.8 0 -0.1 0 -0.3 0 -0.5 -0.5 -0.6 1.2 0.9 0.8 -0.6 -0.1
Select residue pair below:
i_j Score Prob
0092_0132 1.313 0.99
0132_0308 1.189 0.97
0129_0132 0.931 0.85
0132_0312 0.821 0.74
Local Interactions:
i_j Score Prob
0130_0132 0.922 0.84
0132_0133 0.822 0.74
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0151 seconds.