May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0125] and [E:0302]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.2 0.3 -0.6 -0.5 -0.3 0.2 0.8 0.1 -0.4 0.1 -0.2 0.1 -0.1 -0.1 0.9 -0.7 0.6 -0.1 -0.1
F 0.1 -0.9 0.1 0.6 0.1 -0.2 -0.5 0.1 -0.5 -0.1 -0.1 1.2 -0.3 -0.1 0 0.8 -0.1 0.6 -0.1 -0.3
I 0.5 -0.2 -0.6 0 0.2 0.1 -0.1 -0.6 -0.2 -0.6 -0.5 -0.8 0.1 0.7 -0.1 0.2 0.7 0.5 0.3 0.4
L -0.3 -0.4 1 0.9 -0.2 0.2 -0.3 0 0 -0.1 -0.3 0 0.3 -0.2 0.3 -0.5 0.7 -0.3 -0.1 -0.2
V 0.3 -0.1 -0.2 -0.2 0.1 -0.1 -0.1 0.2 -0.3 -0.6 -0.4 0 -0.2 1 -0.1 0.5 0.5 -0.3 -0.1 0.1
M 0.5 -0.4 -0.2 0.6 -0.2 0.2 -0.2 -0.1 -0.3 -0.6 -0.3 -0.5 0.8 0.4 -0.4 -0.2 0 0.8 0.2 -0.1
W 0 -0.1 0 -0.1 0 0 0 -0.1 0 -0.1 0 0 0 0.3 -0.1 -0.1 0 0 0 0
Y -0.2 -0.9 -0.2 0.4 0.2 0.3 0.1 -0.5 1.2 1 0.4 0.8 -0.8 -0.9 0 -0.3 -0.5 -0.3 -0.1 0.7
D -0.5 0.4 1 0.2 0.5 -0.3 0.2 -0.3 -0.2 -0.2 -0.1 -0.2 -0.3 -0.1 0 -0.3 0.5 -0.6 0 -0.1
E 0.7 0.2 -0.4 -0.2 -0.3 -0.1 -0.1 -0.3 0.2 -0.4 0.2 0.8 0.3 0.1 0.4 -0.4 -0.4 -0.2 0 -0.1
K -0.2 1.5 -0.3 -0.1 -0.4 0.1 -0.1 -0.1 -0.2 0.8 0.1 -0.4 0.1 -0.1 0 -0.2 -0.4 -0.2 0 0
R 0.2 0.7 -0.3 -0.5 -0.3 -0.1 -0.1 0.5 -0.1 0.5 0.2 0.3 -0.4 -0.2 0 -0.5 0.1 0.2 0 -0.1
H -0.2 0 -0.3 -0.1 0.1 -0.1 0.2 0.5 0.1 0.4 0 -0.3 0.2 -0.1 0.4 -0.4 -0.2 -0.1 0 -0.1
N -0.2 0.1 0.1 0 0.1 -0.1 -0.1 -0.2 -0.1 0.6 0.2 -0.2 -0.3 0.5 0.4 0.2 -0.4 -0.3 0 0
Q -0.1 0.6 0.1 0.3 -0.3 0.1 0.4 0 -0.3 -0.3 0.8 0.1 1.1 -0.6 1.1 -0.8 -0.6 -0.7 -0.2 -0.2
S -0.3 -0.1 -0.3 -0.3 0.1 0.4 0.9 0.3 0.3 0.2 -0.3 0.6 -0.4 -0.6 -0.6 0.7 -0.1 0.1 -0.1 -0.1
T 0.2 -0.9 -0.1 -0.3 0.7 0 -0.2 0 0.2 0.1 -0.1 -0.5 0.1 0 0.3 0 0.4 0.7 -0.1 -0.1
G 0.2 0.1 -0.3 0.1 0.2 -0.1 0.2 0 -0.1 0.2 -0.2 -0.2 -0.1 0.2 -0.2 0.1 0.1 -0.3 0 0
P -0.2 0.2 0.3 -0.1 0.7 0.4 -0.2 -0.6 -0.2 -0.2 0.6 -0.2 0.3 0.2 -0.2 -0.6 -0.1 0 0 -0.1
C -0.4 -0.1 0.7 -0.6 -0.2 -0.1 -0.1 0.5 0.3 -0.3 -0.3 0.2 -0.5 0.1 -0.6 1 0.7 -0.4 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0125 0.4 0.1 -0.3 0.5 0.1 0.3 -0.9 0.4 -0.9 -0.3 -0.3 0 0.1 0.1 0.9 0.5 0.7 -0.4 0.2 -0.6
0302 -0.2 0.1 0.2 0 0.2 0 -0.1 0.2 -0.5 -0.1 -0.2 0.5 0.2 1.2 0.8 0.7 0 -0.2 -1 -0.8
Select residue pair below:
i_j Score Prob
0267_0302 0.871 0.80
0125_0302 0.857 0.78
0182_0302 0.845 0.77
0302_0308 0.832 0.75
0274_0302 0.757 0.65
0129_0302 0.752 0.64
0223_0302 0.746 0.63
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0185 seconds.