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Coupling matrix for [A:0116] and [L:0120]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0 1 0.8 0 0.6 -0.2 -0.7 -0.1 -0.3 -0.1 -0.1 0 0.1 -0.1 0 -0.1 0.1 -0.5 0.2
F 0.5 1 -0.8 0.4 0.3 0.2 -0.4 0.7 -0.1 -0.3 -0.1 -0.1 -0.4 -0.2 -0.2 0.9 0.3 0.4 -0.8 0.2
I -0.7 -0.1 0.8 0.4 0.2 -0.1 -0.2 1.1 -0.1 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 0.2 0.2 -0.3 0.1 -0.3
L -0.3 0.2 0.6 0.6 0 -0.1 -0.3 -0.7 -0.1 -0.2 -0.1 -0.1 0.1 -0.1 0.3 -0.1 0.5 -0.2 1 0.1
V -0.2 0.1 0.6 0.5 0.2 0.5 -0.3 -0.4 -0.1 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 0.3 0.1 0.8 -0.5 0.1
M -0.2 -0.2 0.7 0 0.3 -0.3 -0.1 -0.3 0 0 0 0 -0.1 0 0 0.3 -0.4 -0.1 0.3 -0.1
W -0.5 -0.4 -0.6 0.3 -0.2 1.2 -0.1 -0.3 0 -0.1 0 0 0.1 -0.1 -0.1 -0.4 -0.1 0.4 0.8 0.3
Y 0.2 -0.6 -0.6 -0.7 -0.1 -0.8 0.3 0.6 -0.1 1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.2 0.1 -0.1 0.3 -0.2
D -0.4 0.7 -0.6 0.1 0.2 -0.2 -0.1 -0.2 0 0 0 0 0 0 0 -0.1 0.5 -0.1 -0.1 -0.1
E 0.9 0 -0.3 -0.1 -0.2 -0.1 -0.1 -0.5 0 -0.1 0 0 -0.1 -0.1 0 0.7 0.7 -0.2 -0.2 -0.1
K 0.2 -0.4 0 0.2 0.1 -0.2 0.5 -0.2 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 -0.1 0
R 0.1 0.3 -0.6 -0.7 0.1 0.1 0 0.8 0 0 0 0 0 0 0 0.3 0 -0.1 -0.1 -0.1
H 0.8 -0.2 -0.2 -0.3 -0.6 0 0.4 -0.1 0 -0.1 0 0 0.4 0 0 -0.2 -0.4 0.3 -0.2 -0.1
N -0.2 0.1 0.1 -0.2 -0.4 -0.1 0 -0.1 0 0.5 0 0 0.2 0 0 -0.1 -0.1 -0.1 -0.1 0
Q -0.4 -0.2 0.7 -0.3 0.3 0.2 0 -0.2 0 0 0 0 0 0 0 -0.1 0.1 -0.1 -0.1 -0.1
S 0.7 -0.2 -0.3 -0.2 0.1 0.3 -0.1 0.3 0 -0.1 0 0 -0.1 0.2 -0.1 -0.4 0.1 0.1 0.1 -0.1
T -0.2 0.2 0.3 0.2 0 0.3 0.3 -0.2 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.3 -0.1 0.3 -0.3 0.2
G 0.1 1 -0.1 0.7 0.8 -0.7 -0.1 -0.4 0 -0.1 0 0 0.1 -0.1 0 -0.1 -0.2 -0.4 -0.2 -0.1
P 0.2 -0.4 0.9 0.1 0.5 -0.4 -0.1 -0.2 0 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 -0.4 0.5 -0.2
C 0.1 -0.3 -0.1 0 0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0116 1 1.5 1 1.3 1 -0.5 0.2 0.7 -0.9 -0.1 -0.9 -0.7 -0.2 -1.1 -0.7 0.1 0.7 -0.1 -0.2 -1.4
0120 1.4 1.8 1.9 2.3 2.1 0.8 -0.8 0.5 -1.6 -1 -1.6 -1.6 -0.8 -1.4 -1.4 0.3 1 0 -0.1 -0.8
Select residue pair below:
i_j Score Prob
0116_0120 2.232 1.00
0116_0216 0.828 0.75
Local Interactions:
i_j Score Prob
0116_0117 1.394 0.99
0115_0116 0.843 0.76
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
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