OPENSEQ.org -1515681596- GREMLIN Submission

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Coupling matrix for [N:0115] and [K:0188]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0	0.1	-0.2	0	-0.3	-0.2	0.1	0.3	-0.2	-0.1	0.5	0.7	-0.3	0.1	0.7	-0.3	-0.5	-0.1	0.2	0.1
F	-0.3	-0.2	-0.2	0.1	-0.2	-0.1	-0.2	0.1	-0.2	0.4	-0.3	0.3	-0.1	-0.2	-0.2	0.3	0.3	0.3	-0.2	-0.1
I	-0.1	-0.3	0.3	-0.3	-0.7	-0.2	0.6	-0.1	0.5	-0.4	0.9	0.4	0	0.1	0.3	-0.5	-0.5	0.1	-0.2	-0.2
L	-0.8	-0.6	0.4	0.4	0.4	0.8	-0.1	0.4	0	0.3	0	-0.3	-0.3	-0.1	-0.2	-0.1	0	-0.2	-0.2	0.3
V	0	0.2	-0.4	-0.1	0.1	0.5	-0.3	0.1	-0.2	-0.5	1.5	0.2	-0.2	0.4	-0.1	-0.4	-0.1	0.1	-0.1	-0.3
M	0.1	-0.1	0.1	-0.3	0	-0.1	-0.1	-0.1	-0.1	0.4	-0.1	-0.1	-0.1	-0.1	-0.1	0.3	-0.3	-0.1	0.1	-0.1
W	-0.4	0.7	0.8	0.9	0.1	-0.2	-0.2	-0.3	-0.1	-0.3	-0.3	-0.3	-0.1	-0.1	-0.2	0	0.2	-0.1	-0.2	-0.1
Y	-0.5	0.5	0.2	-0.1	0.1	-0.3	0.3	0.6	-0.1	0	0.1	-0.3	-0.1	-0.2	-0.3	-0.5	-0.2	0.2	-0.3	0.9
D	0.1	0.9	-0.5	-0.2	0.2	0.3	-0.7	-0.3	0.2	0.1	0	0.2	0.5	-0.1	-0.1	-0.1	0.3	-0.2	0.1	-0.5
E	-0.2	-0.1	0.2	0.4	0.5	-0.2	-0.2	0.6	0	0.1	-0.7	-0.8	0.2	0.3	0	0.7	0.9	-0.6	-0.2	-0.2
K	0.3	0	0.5	-0.2	-0.1	0.1	-0.2	0.8	-0.2	-0.2	-0.4	-0.4	-0.2	0.4	0.3	0.1	0.7	-0.2	-0.3	-0.2
R	-0.4	0	0.3	0.5	-0.3	0	0.1	0.5	-0.2	0.1	-0.5	0.2	-0.2	0.2	1	-0.7	0	-0.3	0.3	-0.3
H	-0.3	-0.2	-0.1	-0.1	-0.1	-0.2	0.2	-0.1	-0.2	-0.1	0.5	0.4	0.3	-0.2	0	-0.1	-0.6	-0.2	0.5	0.2
N	0.2	0	-0.4	-0.9	0.4	0.7	-0.1	-0.4	-0.3	0.6	-0.1	-0.5	0.3	-0.2	0.2	0.5	0	-0.2	0.4	0.2
Q	-0.4	0.4	-0.1	0.7	0.9	-0.3	0.4	-0.3	-0.2	-0.2	-0.4	0	-0.2	-0.3	0.1	0.3	-0.2	-0.2	0.5	-0.2
S	0.8	-0.4	-0.1	0.4	0	-0.1	0.2	0	-0.1	-0.9	-0.6	0.1	0	-0.3	-0.2	-0.6	-0.1	1.4	0.1	0.3
T	1.3	-0.3	-0.4	-0.5	-0.2	-0.4	-0.4	-0.3	0.5	0	-0.1	0.7	0.1	-0.1	-0.6	0.3	0.3	0.7	-0.2	-0.4
G	0.5	-0.4	0.6	0.5	0.2	-0.2	-0.3	-0.5	-0.1	0.2	0.7	-0.4	-0.2	-0.3	0	-0.1	0.1	-0.2	-0.2	0
P	0.1	0.3	-0.4	-0.4	-0.3	0	0.9	-0.4	0.3	0.3	-0.5	0.3	0.4	0.3	-0.5	0.1	0	-0.5	-0.5	-0.3
C	-0.1	0	-0.2	-0.2	-0.2	0	0	0	0	-0.1	0	0	0	0	0	-0.1	0.4	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0115	0.3	-0.5	-0.4	0.7	-0.1	-0.8	-0.8	-0.2	0.4	0.7	-0.1	0.2	0.1	0.3	0.1	0.8	0.1	-0.1	0.4	-1.4
0188	0.1	-0.1	1.1	1.3	1.5	-0.5	-0.6	-0.1	-0.8	0.2	0.1	0	-1	-0.5	0	0.2	0.9	-0.7	-0.5	-0.7

Select residue pair below:

i_j	Score	Prob
0188_0195	1.997	1.00
0115_0188	0.894	0.82
0188_0225	0.843	0.76
0176_0188	0.803	0.71

Local Interactions:

i_j

Score

Prob

See all coupling residues
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