May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0114] and [P:0313]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.5 -0.1 0.3 0.3 0 0 0 0 0 0 0 0 0.3 0 -0.1 0 0 -0.3 -0.1
F -0.1 0.4 0.1 0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.6 0
I 0 0.3 0.4 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.5 0
L 0 0 0.3 -0.2 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0
V 0 -0.2 -0.2 0.6 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0
M -0.1 0.2 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
W -0.1 0 0.1 -0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0
Y -0.1 0.5 -0.2 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
D 0.3 -0.5 0.7 -0.4 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.2 -0.1
E 0.1 -0.3 -0.1 0.3 -0.2 -0.1 0 0 0 0 0.4 0 0 0 0 0 0 0.4 -0.3 0
K -0.3 0.1 0.2 0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0.7 -0.1 0 -0.3 -0.1
R -0.2 0.6 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.6 -0.1
H -0.3 -0.2 -0.2 0.2 0.3 0.3 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.3 -0.1
N 0.3 -0.5 -0.3 0.1 0.1 -0.1 0.6 0 0 0 0 0 0 -0.1 0 -0.1 0.3 0 0.4 -0.1
Q -0.2 0.2 0.1 0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0.1 0.4 -0.1 -0.1 0.2 -0.1 -0.2 0.3 0 0 -0.1 -0.1 0 0 0 -0.3 0.4 -0.1 0 0.1
T -0.2 0.5 0.2 0.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.3 0.3
G 0.5 -0.3 -0.5 -0.4 -0.4 0.2 -0.1 -0.1 0 0 -0.1 -0.1 0 -0.1 0 0.2 -0.1 -0.1 1 0
P 0.3 0.1 -0.3 -0.4 0.2 0 0 0 0 0 -0.1 0 0 0 0 -0.1 -0.1 -0.1 0.2 0.5
C 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0114 0.1 -0.2 -0.5 0.1 0 -0.3 -0.1 0.1 -0.4 0 -0.2 0.3 0.2 0.7 0.1 1 0.1 -0.9 0.7 -0.8
0313 0.2 1.3 0.5 0.1 0.7 0 0 -0.1 -0.3 -0.3 -0.1 -0.1 -0.3 -0.1 -0.3 0 -0.1 -0.1 -1.1 0.2
Select residue pair below:
i_j Score Prob
0111_0114 2.394 1.00
0114_0313 0.963 0.88
0114_0140 0.843 0.76
0114_0117 0.837 0.76
0114_0226 0.824 0.74
0114_0119 0.745 0.63
0114_0197 0.743 0.63
Local Interactions:
i_j Score Prob
0113_0114 1.385 0.99
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.011 seconds.