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Coupling matrix for [A:0110] and [V:0112]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.3 0.1 -0.1 -0.2 0.5 -0.2 -0.1 0 0 0 -0.3 -0.1 0 0.2 -0.1 0.2 0.3 -0.3 -0.1 -0.1
F 0.3 0.3 -0.3 0 -0.6 0.2 -0.1 -0.3 -0.1 0 -0.1 -0.3 -0.2 -0.3 -0.2 0.3 -0.4 -0.1 0.7 0.2
I -0.3 0.1 -0.3 0.1 -0.3 0 -0.1 -0.5 0.3 0.4 -0.3 0.5 0.1 0.2 -0.4 0.3 0 0.5 -0.2 -0.1
L 0.3 -0.3 -0.5 0.3 -0.6 -0.4 -0.1 -0.1 -0.2 -0.3 0.1 0.5 0.1 0.7 0.4 0.2 -0.7 0.6 0.3 -0.1
V -0.4 0 -0.4 1 0.5 0.2 -0.1 0.3 0.6 -0.3 -0.3 -0.3 0.6 -0.1 -0.5 -0.1 -0.4 -0.3 0.2 -0.1
M -0.1 -0.1 -0.3 -0.1 -0.3 0.3 0 -0.2 0.4 0 -0.1 0.3 0.4 -0.1 -0.2 0.1 0.3 -0.1 -0.5 0
W -0.1 0 -0.2 -0.2 -0.2 -0.1 0 -0.1 0 0 0 -0.1 0 -0.1 0.7 -0.1 -0.1 -0.1 -0.2 0
Y 0.2 -0.3 -0.7 0.1 0 0.1 -0.1 -0.4 -0.2 0.3 0.5 -0.1 0.1 -0.1 -0.1 0.2 -0.7 -0.3 1.3 0
D -0.3 -0.2 0.1 -0.1 -0.2 -0.6 -0.2 0.1 -0.4 -0.6 0.4 0.1 -0.2 0.5 1 0.1 0.5 0.4 0.4 -0.1
E -0.4 -0.3 0.4 0.4 0.2 0.6 -0.2 0.1 0.3 -0.1 1 -0.3 0.1 -0.2 0.2 -0.2 -0.4 0.2 -0.4 -0.1
K -0.5 -0.4 0.4 0.5 -0.2 0 -0.1 0.5 -0.4 0.7 -0.4 0 -0.4 0.2 0.1 -0.2 0.6 0.2 -0.2 -0.1
R -0.3 0 0.2 0.1 -0.1 0.3 -0.2 0 -0.2 0.3 -0.2 -0.1 -0.4 0 -0.7 0.1 0.3 0 0.4 -0.1
H 0.8 0.4 -0.1 -0.7 0.3 0.2 -0.2 0 -0.2 0.4 0.1 -0.1 -0.6 -0.3 -0.1 0 -0.5 -0.2 1.1 0.1
N 0.4 0.3 0.7 0.1 0 -0.3 0.5 0.4 -0.1 -0.6 0.8 -0.3 -0.4 0.2 -0.4 -0.3 0.5 -0.4 0.3 -0.2
Q -0.3 -0.5 0.1 0.3 0.6 -0.2 -0.2 0 0.2 0 -0.1 0.1 0.7 0.3 0 -0.2 0.3 -0.1 -0.8 -0.1
S -0.2 -0.4 0.2 -0.4 -0.3 0.2 0.1 0.3 -0.1 0.2 -0.1 -0.1 -0.1 -0.5 0.2 0.1 0.5 0.1 0.6 -0.1
T -0.2 1.4 0.4 0.6 0.3 0 -0.2 0.3 -0.2 -0.5 -0.6 -0.2 0.5 0 -0.8 -0.3 0.1 -0.2 0.2 0.1
G 1.3 0 0.8 0 0.8 -0.6 0.2 -0.5 -0.3 0.2 -0.7 0.3 -0.3 -0.2 0.4 -0.1 0.1 0.3 -1 -0.2
P -0.2 0.1 0.4 -0.3 0.1 0 0.2 0.3 -0.1 -0.6 0.4 0.3 0 -0.2 1.1 -0.1 -0.5 -0.1 -0.6 -0.1
C -0.1 -0.1 0.1 -0.4 -0.3 0.4 0 -0.1 -0.1 -0.1 -0.1 0.3 0.1 -0.1 -0.1 0.2 0.3 -0.1 -0.4 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0110 -0.2 -0.9 -0.2 -0.2 -0.1 -1.3 -1.9 -0.2 0.6 0.9 0 0.6 0.6 0.9 0.4 1.1 0.6 1.2 0.5 -1.5
0112 -0.2 -0.3 0.6 1.3 0.6 -0.1 -1.6 -0.1 -0.5 -0.3 -0.3 0.4 -0.1 0 0.1 0.8 0.6 -0.4 0.9 -1.7
Select residue pair below:
i_j Score Prob
0104_0112 0.911 0.83
Local Interactions:
i_j Score Prob
0112_0113 1.409 0.99
0110_0112 0.812 0.72
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
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