May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0109] and [A:0110]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.2 -0.1 0.6 0 -0.2 -0.1 -0.3 -0.4 0.2 0.2 -0.3 -0.2 -0.5 -0.8 0.6 -0.2 0.6 1.1 -0.2
F 0.3 -0.1 0.1 -0.3 -0.4 0.2 -0.1 -0.3 0.5 0.5 -0.5 0.3 0.9 1.3 -0.2 -0.4 -0.2 -0.6 -0.3 -0.2
I -0.3 0 0.1 0.8 -0.4 -0.1 -0.1 0.6 0.9 0.8 -0.1 -0.6 -0.6 -0.6 0.6 -0.4 -0.7 -0.6 0.7 -0.1
L -0.1 0.3 -0.5 0.4 -0.6 -0.2 0.2 0 -0.1 -0.2 0.3 -0.3 0 0.1 -0.4 -0.2 -0.5 0.8 0.6 0.3
V 0.5 0.3 0.2 -0.4 -0.5 -0.1 -0.1 -0.4 -0.7 0.2 -0.3 0.5 -0.7 -0.3 1.3 -0.1 -0.3 0.3 1 -0.1
M 0.3 -0.1 -0.1 0.1 -0.2 0 0 -0.2 -0.3 0 0 0.5 0 0.3 0.1 -0.5 0.4 -0.4 -0.2 0
W -0.2 -0.1 0.4 0.5 0 -0.1 0 -0.3 -0.5 -0.3 -0.3 -0.5 0.6 -0.6 -0.1 0.4 -0.4 0.9 0.3 -0.1
Y -0.2 -0.4 0 -0.4 -0.8 -0.2 -0.1 0 0.6 -0.4 -0.5 0.7 0.1 0.8 -0.2 0.3 0.8 -0.4 1.3 -0.2
D -0.1 -0.4 0.2 -0.7 0.3 -0.3 -0.1 0.4 0.1 0.3 0.2 0.5 -0.3 0.6 0.8 0.4 0.1 -0.7 -0.5 -0.2
E -0.6 0.4 0.3 -0.4 0.6 -0.2 -0.1 -0.1 -0.1 -0.3 0.2 0.3 -0.3 -0.1 -0.5 0.6 1 0.4 -0.5 -0.2
K 0.2 -0.4 0.2 0.2 0.7 -0.2 -0.1 0.1 0.2 -0.2 0.1 -0.2 -0.5 0.2 -0.1 0.3 0.3 0.3 -0.2 -0.2
R 0.2 -0.3 -0.3 -0.5 0.2 0.3 -0.1 -0.2 0.1 -0.3 0.5 -0.6 -0.3 -0.3 -0.7 0.3 0.2 1.2 0.3 -0.1
H 0 -0.5 0.1 0 0.3 0.1 -0.1 -0.3 -0.9 -0.1 1.3 0.8 0.5 0.1 0.2 -0.6 -0.6 0.6 -0.2 0.3
N -0.7 0.1 -0.7 -0.4 -0.4 -0.1 0.3 0.4 0.5 0 0.5 -0.5 1.2 1.3 0.6 -0.8 -0.1 -0.4 -1 0.7
Q 0.5 -0.3 -0.5 0.4 0.8 -0.2 -0.1 0.7 -0.4 -0.9 -0.5 1.1 -0.2 -0.1 -0.8 -0.1 0.8 0.3 -0.7 0.3
S -0.7 0.6 0.7 -0.4 0.1 0.5 -0.1 -0.1 0.5 0.8 -0.6 -0.7 0.6 -0.2 0.4 0.7 -0.3 -0.5 -0.4 -0.2
T 0.3 0 0.4 0 -0.4 0.3 -0.1 -0.2 0.3 0.8 0.2 -0.4 -0.2 -0.6 -0.5 0.2 0.3 0.3 -0.6 -0.1
G 0.5 0.7 -0.2 0.4 0.2 -0.2 -0.3 0.5 -0.1 0.1 -0.2 0.3 0.3 -0.1 -0.1 -0.3 0.2 -0.8 0.6 -0.4
P 0.5 0.2 -0.2 0.4 0.9 0 -0.1 -0.1 0.1 0.4 -0.1 -0.6 -0.4 -0.2 -0.2 -0.2 -0.1 -0.4 -0.5 -0.1
C -0.1 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 0.6 -0.3 -0.1 0.2 0.2 -0.3 -0.2 0.6 -0.3 -0.2 -0.2 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0109 0.1 0.4 -0.4 0.1 -0.2 -1.3 -0.8 0.5 0.6 0.2 0.5 0.1 0.7 0.7 0.2 0.7 -0.3 1.4 -0.5 -1.7
0110 -0.2 -0.9 -0.2 -0.2 -0.1 -1.3 -1.9 -0.2 0.6 0.9 0 0.6 0.6 0.9 0.4 1.1 0.6 1.2 0.5 -1.5
Select residue pair below:
i_j Score Prob
Local Interactions:
i_j Score Prob
0109_0110 1.151 0.96
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0158 seconds.