May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ccr6 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [T:0098] and [L:0121]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.1 0 1.1 0 0.3 0.2 -1 0.2 -0.2 0.1 0.1 -0.5 -0.5 -0.3 0.4 0.7 -0.5 -0.1 0.5
F 0 0.3 -0.4 0 0.2 -0.3 -0.1 0.1 -0.1 -0.2 -0.1 -0.2 -0.1 0.8 0.1 -0.6 0.1 0.1 0.4 0.3
I -0.1 -0.1 -0.3 -0.2 0.3 0.2 0.2 0.3 -0.1 -0.1 -0.1 0.1 0.2 0 -0.3 -0.2 0.4 0 0.7 -0.4
L -0.3 -0.2 -0.4 0.8 0 0 -0.3 0.1 -0.1 1.2 -0.1 0.1 1.3 -0.4 0.4 -0.2 -0.6 0.4 -0.2 -0.8
V 0.3 0.2 -0.2 0.3 -0.1 0 1.8 0.3 -0.1 0.1 -0.2 -0.4 -0.5 -0.3 -0.4 -0.4 0.6 0.1 -0.2 -0.1
M 0.2 1.1 -0.6 0.1 0.2 0.1 -0.1 0.2 0 -0.1 -0.1 -0.2 -0.3 -0.2 0.3 0.5 -0.3 -0.3 -0.1 -0.2
W -0.3 0 0.1 1.5 -0.7 0.1 0 -0.4 0 -0.1 0 0.4 0.4 -0.1 -0.1 -0.4 -0.6 -0.2 0 -0.2
Y 0.8 -0.1 0.3 0.3 0.1 0.6 -0.3 -0.5 -0.1 -0.2 0.1 -0.3 0.9 -0.3 -0.3 -0.2 -0.4 -0.3 -0.1 -0.1
D -0.2 0.1 0.3 -0.6 0.3 0.1 0 0.1 0 -0.1 0 -0.1 -0.1 0.4 -0.1 -0.2 -0.2 -0.1 0 -0.1
E 0.1 -0.3 -0.2 -0.3 -0.4 -0.1 0 1.2 0 0 0 -0.1 -0.1 -0.1 0 0.2 -0.2 -0.1 0 -0.1
K -0.5 1.5 -0.3 -0.4 -0.5 -0.1 0 0.5 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 0.1 0 0.1
R -0.1 -0.2 -0.2 -0.3 -0.3 -0.1 -0.1 -0.3 0 0 0 0 0.4 -0.1 0.8 -0.2 0.2 0 0 -0.1
H -0.1 0.2 -0.2 -0.3 -0.4 -0.1 0 0.9 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1 0 0 -0.1
N 0.8 -0.6 -0.1 -0.9 -0.6 -0.3 -0.2 -0.4 0 0.1 -0.1 0.2 0.2 0.6 0 0.7 0.2 0.1 -0.1 0
Q -0.1 -0.2 0.2 -0.4 0.5 0.2 0 -0.2 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1 0 0 0
S -0.4 -0.7 0.4 0 0.5 0.6 -0.5 -0.4 -0.2 0.6 0.1 -0.6 -0.3 0.7 -0.3 -0.4 -0.1 0.3 -0.3 1.6
T 0.5 -0.4 0.5 0.5 0.1 -0.2 -0.6 -0.9 0.1 -0.4 -0.1 -0.7 -0.5 0.4 0.4 1.3 1.1 -0.3 0 0.2
G -0.2 -0.3 0.3 -0.4 0.4 -0.6 0 0.9 -0.1 -0.3 0.7 1.3 0.1 0 0.2 -0.4 -0.2 -0.2 -0.2 -0.3
P -0.1 0 -0.5 0.5 -0.5 -0.2 0.2 0.8 0 -0.1 -0.1 -0.1 -0.1 0.1 0.1 0.3 -0.2 -0.1 -0.1 -0.2
C -0.2 0.5 0.9 -0.4 1.4 0 -0.3 -0.5 -0.2 -0.3 -0.2 0.5 -0.6 -0.6 -0.5 0.5 0.5 0.7 -0.2 -0.3

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0098 0.9 0.3 0.7 0.8 1.1 0 -1 0.2 -0.7 -1.1 -1.3 -0.9 -1.1 0.2 -1.1 1.6 1.4 1.1 -0.4 0.6
0121 0.3 0.9 0.8 1.5 0.7 0.2 -0.7 1.3 -1.1 -0.5 -0.8 -0.3 0.4 -0.1 -0.2 0.1 0.4 -0.6 -1 -0.5
Select residue pair below:
i_j Score Prob
0098_0102 1.288 0.98
0098_0121 1.094 0.94
0098_0125 0.844 0.76
0049_0098 0.767 0.66
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...

Page generated in 0.0161 seconds.