May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0085] and [C:0138]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.4 0.2 0.2 -0.4 0.6 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.4 0 -0.3
F 0.4 -0.6 -0.2 1.1 0.1 -0.1 -0.4 -0.3 0 0 0 0 -0.1 -0.1 -0.1 1.1 1 -0.1 -0.1 -0.9
I 0.6 -0.2 0.7 0 0.9 0.4 -0.4 -0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.2 0 -0.4 -0.3 -0.2 0.4
L 0.3 0 -0.3 0.6 -0.2 0.2 1.2 0.6 -0.3 -0.3 -0.3 -0.3 -0.1 0.3 -0.1 0.2 0.2 -0.8 0.1 0.3
V 0.9 -0.2 0.6 -0.6 0.3 -0.3 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.4 0.2 0.5 -0.1 0.2
M -0.1 -0.2 0.1 0.5 0.1 -0.2 -0.3 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 0.2 0.2 -0.1 1.3
W -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Y 0.1 0.1 -0.2 0.1 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0.3 0 0.4
D -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
E -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
K -0.1 -0.1 0.4 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
R -0.3 1.9 -0.2 -0.4 -0.3 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 -0.4
H -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
N -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Q -0.1 -0.1 0 -0.1 -0.1 0 0 0.5 0 0 0 0 0 0 0 0 0 0 0 -0.2
S -0.2 -0.2 -0.1 0.4 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0.6
T 0.2 -0.3 -0.1 0.5 0.4 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0.1
G -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
P -0.2 0.6 -0.2 0 -0.3 0.7 -0.1 -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0.4 0 -0.2
C -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0085 0 0.9 0.3 1.7 0.2 1.1 -0.5 0.5 -0.5 -0.5 -0.4 -0.5 -0.5 -0.5 -0.3 -0.2 0.3 -0.5 0.5 -0.5
0138 1.7 1.4 1.2 1.9 1.7 0.4 -0.8 -0.3 -1.2 -1.2 -1.2 -1.2 -1.1 -0.6 -1.1 0.1 0.7 0.5 -1 1.3
Select residue pair below:
i_j Score Prob
0085_0139 1.010 0.91
0085_0267 0.950 0.87
0085_0230 0.910 0.83
0067_0085 0.847 0.77
0085_0324 0.808 0.72
0082_0085 0.799 0.71
0085_0144 0.758 0.65
0085_0138 0.746 0.63
Local Interactions:
i_j Score Prob
0084_0085 0.885 0.81
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0474 seconds.