May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
ccr6 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0084] and [L:0274]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 0 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 0 0 0
F -0.1 0.7 0.2 0.4 -0.2 -0.2 -0.5 0 -0.2 -0.6 0.7 0.1 0.2 0.2 0.4 -0.2 0.8 -0.4 -0.3 -0.1
I 0.1 0.2 -0.5 -0.5 -0.2 -0.1 -0.4 0.1 0.4 -0.1 0.6 0.1 0.1 0.4 -0.1 0.5 -0.4 0.5 0 -0.1
L 0.3 0.6 0 0.3 -0.7 -0.5 0.7 0.2 -0.9 -0.1 -0.5 0.1 0.1 1.2 0 0.2 -0.6 0.3 -0.1 0.1
V 0 0 0.9 -0.7 0.1 0.4 -0.2 0.7 -0.1 0.3 -0.2 -0.3 -0.3 -0.2 -0.2 0.2 0.5 -0.4 0 0
M -0.3 0.1 -0.2 0.3 0.5 -0.2 0.2 -0.1 0.1 -0.1 -0.1 -0.3 -0.1 0.5 -0.2 0.3 0.1 -0.3 0 0
W -0.3 -0.2 -0.3 0.2 -0.1 -0.3 -0.1 0.3 0.6 0.2 -0.3 0.2 -0.1 -0.4 -0.4 0.3 -0.6 1.2 0 -0.1
Y -0.1 -0.7 0.6 0.8 0.1 0.5 0.4 -0.5 -0.3 0.3 -0.1 0.7 -0.5 -0.2 0.7 -0.8 0.8 -0.3 -0.3 -0.6
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 0 0 0 -0.1 0 -0.1 0 0.4 0.3 -0.1 0 0
N -0.1 -0.1 -0.1 0.2 0.4 -0.1 0 -0.1 0 0 -0.1 -0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 -0.1 -0.1 0.1 -0.1 0.4 0 0 0 0 0 0 0 -0.1 0 -0.1 0 -0.1 0 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 -0.1 -0.1 0.1 0.3 -0.1 -0.1 -0.2 0.4 -0.1 0.3 -0.1 0.3 -0.2 -0.1 -0.1 -0.1 -0.1 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.6 0 -0.1 -0.2 0.5 0.5 -0.1 -0.3 -0.2 -0.1 -0.3 -0.2 -0.2 -0.4 0.1 0.3 -0.1 0 0 0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0084 -0.4 1.1 0.8 2 0.4 0.4 -0.5 0.9 -0.6 -0.6 -0.6 -0.6 -0.3 -0.1 -0.6 -0.3 -0.6 0 -0.6 0.3
0274 0.2 0.2 0.3 1 0.6 0.4 -0.5 0.4 -0.6 -0.6 -0.1 0 -0.1 0.7 -0.1 0.8 0.4 0.2 -1.5 -1.1
Select residue pair below:
i_j Score Prob
0274_0277 1.014 0.91
0084_0274 0.992 0.90
0125_0274 0.808 0.72
0274_0302 0.757 0.65
0270_0274 0.748 0.63
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M S G E S ...
Page generated in 0.0112 seconds.